KEGG   Sus scrofa (pig): 100157937
Entry
100157937         CDS       T01009                                 
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
  KO
K12821  pre-mRNA-processing factor 40
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100157937 (PRPF40A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssc03041]
    100157937 (PRPF40A)
Spliceosome [BR:ssc03041]
 Complex A
  U1 snRNP components
   U1 related factors
    100157937 (PRPF40A)
 Complex B
    100157937 (PRPF40A)
SSDB
Motif
Pfam: FF WW
Other DBs
NCBI-GeneID: 100157937
NCBI-ProteinID: NP_001231502
Ensembl: ENSSSCG00000015867
LinkDB
Position
15:complement(60388582..60440478)
AA seq 957 aa
MRPGTGAERGGLMVSEMESHPPSRGPGDGERRLSGSSLCSSSWVSADGFLRRRPSMGHPS
MHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQAS
MQPALPPGVNNMDVAAGATSGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQ
LLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQNTIVAGSLITKSNLHAMI
KAEESSKQEECTTTSAAPVPTTEIPTTMSTMAAAEAAAAVVAAAAAAAAAAAAANASAST
SASSTVGGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLTSTPAVQDQSVEVSSNTG
EETSKQEAVADFTPKKEEEENQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMK
MIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTST
TRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDN
MANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSL
LRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPGSTALDL
FKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLA
FNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRERFVKEPAF
EDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSH
SKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKD
RESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGELEKRRRTLLEQLDDDQ
NT seq 2874 nt   +upstreamnt  +downstreamnt
atgaggccggggacgggagctgagcgaggaggcctcatggtgagtgaaatggagagccat
cctccctcgcggggtcccggggacggggagcggagattgtccggctcaagcctctgctcc
agctcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcaccctagc
atgcattatgccccaatgggaatgcaccctatgggtcagagagcgaatatgcctcctgta
cctcatggaatgatgccgcaaatgatgccccctatgggagggccaccaatgggacaaatg
cctggaatgatgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaggcttcc
atgcaacctgctttaccgccaggagtaaataatatggatgtagcagcaggtgcaacatca
ggcgccaaatcaatgtggactgaacataagtcacctgatggaaggacctactactataat
actgaaacaaagcagtctacttgggagaagccagatgatcttaaaacccctgccgagcaa
cttttatctaaatgcccttggaaggaatacaaatctgactctggaaagccttactattat
aattctcaaacaaaagaatcccgctgggccaaacctaaagaacttgaggatcttgaagga
taccagaataccattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatc
aaagctgaagaaagcagtaaacaagaagagtgcaccacaacatcagcagccccagttcct
acaacagaaattccaaccacaatgagcaccatggctgctgcagaagcggcagctgctgtt
gttgcggcagcagctgcagccgcagctgcagctgctgcagccaatgccagtgcttccacc
tctgcttctagtactgtcggtggaactgttccagtcgttcctgagcctgaggttacttcg
attgttgctactgttgtagataatgaaaatacagtaacaatttcgactgaagaacaagca
caacttactagtacccctgctgttcaggatcaaagtgttgaagtgtctagtaatactgga
gaagaaacatctaagcaggaagccgtagctgattttactcctaaaaaagaagaggaagaa
aaccaaccagcaaaaaaaacatatacttggaatacaaaggaggaagcaaagcaagcattt
aaagaattactgaaagaaaagcgggtaccatcaaatgcttcatgggaacaagctatgaaa
atgattattaatgacccacgatacagtgctttagcaaagttgagtgaaaagaagcaggcc
tttaatgcttataaagtccagacagaaaaagaagaaaaagaagaagcaagatccaaatac
aaagaggctaaggaatcctttcaacgttttcttgaaaatcatgagaaaatgacttctaca
actagatacaaaaaagcagagcaaatgtttggagagatggaagtctggaatgcaatatca
gaacgtgatcgtcttgaaatctatgaagatgttttattctttctttcaaaaaaagaaaag
gagcaagcaaagcagttacgaaaaagaaattgggaagccttaaaaaacatacttgacaac
atggctaatgtgacatattctactacttggtccgaagcccagcagtatctgatggataat
ccaacttttgcagaagatgaggaattacagaacatggataaagaagatgcattaatttgc
tttgaagaacacattcgggctttagaaaaggaagaagaagaagaaaaacagaagagtttg
ctgagggaaaggagacgacagcgtaaaaatagagaatcttttcagatatttttagatgaa
ttgcatgaacatggacaactgcattctatgtcatcttggatggaattatatccaacaatt
agttctgatattagattcactaatatgcttggtcagccgggatcaactgcacttgacctt
ttcaagttttatgttgaggatcttaaagcacgttaccatgatgagaagaagataataaaa
gacattctaaaggataaaggatttgtagttgaagtaaatactacttttgaagactttgtg
gcaataatcagttcaacaaaaagatcaaccacattagatgcaggaaacattaagttagct
ttcaatagtttactagaaaaggcagaagcccgtgaacgtgaaagggaaaaagaggaggct
cggaagatgaaacgaaaagaatcggcatttaagagtatgttgaaacaagcaactcctcca
atagaattggatgctgtctgggaagatatccgggagagatttgtaaaagagccagcgttt
gaggatataactctagaatctgaaagaaaacgaatatttaaagattttatgcatgtgctt
gagcatgaatgtcaacatcatcattcaaagaacaagaaacattctaagaaatctaaaaaa
catcacaggaaacgttcccgctctcgatcagggtcagattcagatgatgatgacagccat
tcaaagaaaaaaagacagagatcagagtctcgctctgcttcagaacattcttctagtgct
gaatctgagagaagttataagaaatcaaaaaaacataagaagaaaagcaagaagagaagg
cataaatctgactccccagaatcagatgctgaacgagagaaggataaaaaagaaaaagac
cgggaaagtgaaaaagacagaactagacaaagatcagaatcaaaacacaaatcacctaag
aaaaagactggaaaggattctggtaattgggacacttctggcagtgaactgagtgaaggg
gaattagaaaagcgcagaaggacccttctggagcaactggatgatgatcaataa

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