Sus scrofa (pig): 100518876
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Entry
100518876 CDS
T01009
Symbol
SNX18
Name
(RefSeq) sorting nexin-18 isoform X2
KO
K17923
sorting nexin-9/18/33
Organism
ssc
Sus scrofa (pig)
Pathway
ssc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100518876 (SNX18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100518876 (SNX18)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100518876 (SNX18)
Membrane trafficking [BR:
ssc04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
100518876 (SNX18)
Macropinocytosis
Sorting nexins
100518876 (SNX18)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100518876 (SNX18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_9
SH3_2
SH3_1
HBM
XFP
Motif
Other DBs
NCBI-GeneID:
100518876
NCBI-ProteinID:
XP_003134014
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All DBs
Position
16:33776964..33801391
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AA seq
548 aa
AA seq
DB search
MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIR
APEPGPAGDGGPGVPARYANVPPGGFEPLPAAPPASFKPPPDAFQPLLQPQQAPPPSTFQ
PPGSGFPYGGGALQPSPQQLYSGGYQASQGSDDDWDDEWDDSSTVADEPGALGSGAYPDL
DGSSGGVGAAGRYSLSTRSDLSLGSRGGSVPPQHHPSGAKSSATVSRNLNRFSTFVKSGG
EAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKL
VPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWM
NHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALD
LQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRGLSQAFEL
DQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQK
GSQQPLKV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgtgcccgggcgctgtatgacttcaggtcggaaaacccgggggagatctcg
ctacgggagcatgaggtgctgagcttgtgcagcgagcaggacatcgaaggctggctcgag
ggggtcaacagccgcggagaccgcggccttttcccagcctcgtacgtgcaggtgatccgc
gcccctgagcccggcccggcgggtgacggcggcccgggcgttcctgcccgctacgccaac
gtaccacccggcggcttcgagcccttgcccgccgcgccgcccgcctctttcaagccgccg
ccggacgccttccagccactactgcagccgcagcaggcgccgccgccaagcaccttccag
ccgccaggctccggtttcccttacggcgggggcgccctgcagccttcgccgcagcagctt
tacagtggcggctaccaggccagccagggcagcgacgatgactgggacgacgagtgggac
gacagctccacggtggctgacgagccgggcgcgctgggcagcggcgcgtacccggacctc
gacggctcttctgggggcgtcggcgcggcgggacgctacagcctttccacgcgctccgat
ctgtctctgggctcccgcggtggctcggtgccgccgcagcatcacccgtcgggggctaag
agctctgccaccgtgagccgaaacctcaaccgtttctccaccttcgtcaagtccggcggg
gaggccttcgtgctgggcgaggcgtccggcttcgtgaaggacggggacaaactgtgcgtg
gtgctggggccctacggccctgagtggcaagagaatccctaccccttccagtgcaccatc
gacgaccccaccaaacagaccaagttcaagggcatgaagagctacatctcctacaagttg
gtgcccacgcatactcaggtgcctgtgcatcggcgctacaagcacttcgactggctctat
gcgcgtctggcggagaaattccccgtcatctcggtgccccatctgcccgagaagcaggcc
actggccgtttcgaagaggacttcatctccaaacgcaggaagggcctgatctggtggatg
aaccacatggccagtcacccggtgctggcgcagtgcgatgtcttccagcacttcctgacg
tgtcccagcagcaccgacgagaaggcctggaaacagggcaagaggaaggcggagaaggac
gagatggtgggcgccaacttcttcctgacccttagcacaccccccgccgccgcccttgac
ctgcaggaggtggagagcaagatcgatggcttcaagtgcttcaccaagaagatggacgac
agcgcgctgcagctcaaccacacagccaacgagttcgcgcgcaagcaggtgacgggcttc
aagaaggagtatcagaaggtgggccagtccttccggggcctcagccaggcctttgagctg
gaccagcaggccttctccgtcggcctgaaccaggccatcgccttcaccggagatgcctac
gacgccatcggcgagctcttcgccgagcagcccaggcaggacctggaccctgtcatggac
ctgttagcgctgtatcaggggcatctggccaacttccccgacatcatccacgttcagaaa
ggcagtcaacagccactaaaggtttga
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integrated database retrieval system
