Sus scrofa (pig): 100523319
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Entry
100523319 CDS
T01009
Symbol
LNX1
Name
(RefSeq) E3 ubiquitin-protein ligase LNX isoform X1
KO
K10692
ligand of Numb protein X 1/2 [EC:
2.3.2.27
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100523319 (LNX1)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100523319 (LNX1)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100523319 (LNX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-RING_5
U-box
Motif
Other DBs
NCBI-GeneID:
100523319
NCBI-ProteinID:
XP_020956872
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All DBs
Position
8:complement(40232837..40473101)
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AA seq
738 aa
AA seq
DB search
MNLSDPADEPDLSPAPLCVVCGQAHSPEENHFYTYPEEVDDDLICHICLQALLDPLDTPC
GHTYCTVCLTNFLVEKDFCPVDRKPVVLQHCKKSSILVNKLLNKLLVTCPFTEHCEEVLQ
RCDLEHHFQTSCKGASHYGLTKDRKRRSQDGCPDGCASLTATALSPEASAAATISLMTDE
PGLDNPAYVSTAEDGQPATGPLDSGRSNRTRARPFERSTIRSRSFKKINRALSVLRRTKS
GSTVANQSDQGREDSENTTAPDIFPRLYHLIPDGEITSIKINRVDPNENLSIRLVGGSET
PLVHIIIQHIYRDGVIARDGRLLPGDIILKGPFRQVNGMDISNVRHSYALRLLRQPCHVL
RLTVLREQKFRSRNDTPPLDTYGPRDDSFHVILNKSSPDEQLGIKLVRRVDEPGVFIFNV
LDGGVADRHGQLEENDRVLAINGHDLRYGSPESAAHLIQASERRVHLVVSRQAQQQGPDI
FQEASWSSNGSQSPGPGDRSNTPKPLHPGVTCHEKVVSVRKEPSESLGMTVAGGASHREW
DLPIYVISVEPGGVISRDGRIKTGDILLNVNGIELTEVSRSEAVALLKSTSSSVVLKALE
VKEYEPQEDCSNPAALDSNHNNTAPPGDWSPSWVMWLELPQYLYNCKDVVLRRNTAGSLG
FCIVGGYEEYNGNKPFFIKSIVEGTPAYNDGRIRCGDILLAVNGRSTSGMIHACLARMLK
ELKGKITLTIVSWPGTFL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtcagaccccgctgatgaaccggacctcagccctgcacccctatgtgtggtg
tgtggccaagcccactcccccgaggaaaaccacttctacacttacccagaagaggtggac
gatgacctcatttgccacatctgcctgcaggcactgctggaccctctggacactccctgt
ggacacacgtactgcacagtctgcctcaccaacttcctggtggagaaggacttctgcccc
gtggaccgcaagcctgtggtcttgcagcactgcaagaaatccagcatcctggtcaacaag
ctcctcaacaagctgctggtgacctgcccattcaccgagcactgtgaggaggtgctgcag
cgctgtgacctggagcatcactttcaaacaagctgtaaaggtgcctcccactacggcctc
accaaagacaggaagaggcgctcccaggatggctgtcccgacggctgtgccagcctcacg
gccacagcgctctccccagaggcttctgcagctgccaccatctccttaatgacagacgag
cctggcctagacaaccctgcctacgtgtccacagcggaggacggtcagccagccacgggg
cccctggactctggccggagcaaccgaacgcgggcacggccctttgagcgatccaccatc
agaagcagatcttttaaaaaaataaaccgagctttgagtgttcttcgaaggacaaagagt
ggaagtacagttgccaaccaatccgaccagggcagagaggattctgaaaacaccaccgcc
cctgacatctttccaaggttgtatcacctgattccagatggtgaaattaccagcatcaag
atcaatcgcgtggatcccaatgaaaacctctccattaggctggtgggaggcagcgaaacc
cccctggtccatatcattatccagcacatttatcgtgatggggtgattgccagagacggc
cggctactgccaggagacatcatcctaaagggccccttccggcaggtcaatgggatggac
atcagcaacgtgcgtcacagctacgccctgcgcctcctgcggcagccgtgccatgtgctg
cgcctgacagtgctgcgggagcagaagttccggagtaggaatgacacgccgcccctggac
acctacgggccccgggatgacagtttccatgtgatcctcaacaaaagcagccccgacgag
cagcttggcataaaactggtgcgcagggtggatgagcctggggtgttcattttcaacgtg
ctggatggtggtgtagcggaccgccacggtcagctggaggagaacgatcgggtattggcc
atcaatggacatgatcttcggtacggcagcccggaaagcgccgcgcatctgattcaggcc
agtgaaaggcgcgttcatctcgtcgtgtcccgccaggctcagcagcagggtcctgacatc
tttcaggaggcgagctggagcagcaacggcagccagtccccagggccgggggacaggagc
aacactcccaagcccctccatcctggggtcacttgtcacgagaaggtggtaagtgtccga
aaagaacccagcgaatccctcggcatgaccgtcgcagggggagcatcgcacagggagtgg
gatttgccaatctatgtcatcagtgttgagcccggaggagtcataagcagagatggaaga
ataaaaacaggtgacattctgttgaatgtgaacgggattgaactaacagaggtcagccgg
agcgaggcagttgctttattgaaaagcacatcctcctcggtggtacttaaggctttggaa
gtcaaagaatatgagccccaggaagactgcagcaacccagcagccctggactccaaccac
aacaacacagccccacccggcgactggtccccctcctgggtcatgtggctggaattacca
cagtacctgtataactgtaaagatgttgtattacgaagaaacacagctggaagtctgggc
ttctgcattgtaggaggttacgaagaatacaatgggaacaaacctttcttcatcaaatcc
attgtggaaggaacaccagcatacaatgatggaagaattagatgtggggatattcttctt
gctgtaaatggtagaagtacatcaggaatgatacatgcttgcttggcaaggatgctgaaa
gaacttaaaggaaaaattactctcactattgtttcttggcctggcacttttttatag
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