Sus scrofa (pig): 100523515
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Entry
100523515 CDS
T01009
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
3.6.4.13
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssc03009
]
100523515 (DDX54)
Enzymes [BR:
ssc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
100523515 (DDX54)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
Pre-60S particles
Helicases
100523515 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
100523515
NCBI-ProteinID:
XP_020928919
Ensembl:
ENSSSCG00000009876
LinkDB
All DBs
Position
14:complement(38650660..38668266)
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AA seq
879 aa
AA seq
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MAAGRRPAAAQRSGAAMAQWRKKKGLRKRRGAASQSRSSDSEDGEFEIQAQDDARAQKLG
PGRPLPTFPTSECASDVEPDTRELVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPT
PIQRKTIPLILDGKDVVAMARTGSGKTACFLIPMFERLKARSAQTGARALILSPTRELAL
QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS
VEYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIR
LDVDAKLNEQLKTSFFLVREDAKAAVLLHLLRNVVRPQDQTVVFVATKHHAEYLNELLMT
QRVSCAHIYSALDQTARKINLAKFTHGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGK
LFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRSLTLACPHEEPTGAGGGRDCV
LGRVPQGVVDDEDCGLRTTLEASLELRSLGRVADNAQQQYMRSRPAPSPESIKRAKELDL
AGLGLHPLFSSHFQEEELQQLQLVDSIRNYRSRTTIFEINASSRDLSSQVMRAKRQKDRK
AIARFQQGRQERQESPAGPALSLQAPPEEQPEEEEKEAAGESVEDVFTEVVGQKRQKPGP
DRGAKRRREEARQRDQAFYVPYRPKDFESERGLSVGGDGGAFEQQAAGAVLDLMGDEAQS
LTRGRQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDS
EEEGAFDRRGPERRGGKHGRGQGASQPRTPGTPAGRVRSELKTKQQILKQRRRAQKLRFL
QRGGLKQLSARNRRHAQELQQGAFGRGAHSKKGKMRKKM
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggcaggcgcccggcggccgcacagcggtccggagctgccatggcccaatgg
aggaaaaagaaggggctccggaagcgccggggagcggcctcccagtcccgcagcagcgac
tcggaggacggcgagtttgagatccaggcgcaagatgacgcccgggcccagaagctggga
cctgggagacccctcccgacctttcccacctcggaatgtgcctcagacgtggagccggac
acgcgggagttggtgcgagcccagaacaagaagaagaagaagtcgggaggcttccagtcc
atgggcttgagctaccctgtgttcaaaggcatcatgaagaagggctacaaggtgccgacg
cccatccagaggaagaccatcccattgatcctggatggcaaggacgtggtggccatggcc
cggacgggcagcggcaagacggcctgcttcctcatccccatgttcgagcggctcaaggcc
cgcagcgcccagactggggcccgtgccctcatcctctcccccacccgagagctggccctg
cagaccatgaagttcaccaaggagctgggcaagttcactggcctcaagactgccttgatc
ctgggtggggataaaatggaagatcagtttgcagccctgcacgaaaatcccgacataatc
attgctacccccgggcgcttggtgcatgtggctgtggagatgaacctgaagctccagagc
gtggagtacgtggtatttgatgaggctgacaggctctttgaaatggggtttgcagagcag
ctgcaggaaatcattggccgcctccctgggggccatcagactgtcttgttctctgccacg
ctgcccaagctgctggtggagttcgcccgggcaggcctcactgagcccgtgctcatccgg
ctagacgtggacgccaaactcaacgagcagctcaagacctccttcttcctcgtgcgggag
gacgccaaggccgccgtgctgctccacctgctgcgcaatgtcgtgcggccccaggaccag
acggtggtgtttgtggccaccaagcaccacgcagagtatctcaatgagctgctgatgacc
caacgggtgagctgcgcccatatctatagcgccctggaccagacggcccgcaagatcaac
ctggccaaattcacacatggcaagtgctccaccctcatcgtgactgacctggccgctcgg
ggcctggacatcccgctgctggacaatgtcatcaactacagcttcccggccaagggcaag
ctcttcctgcaccgtgtgggccgcgtggcccgagctggccgaagtggcacagcctactcc
ctggtggctccagatgaggtcccgtacttgctggacctgcatctgttcctgggccgctcc
ctgaccctcgcctgtccccacgaggagcccacgggtgcaggcggtggcagggattgtgtg
ctaggccgggtgccgcagggcgtggtggatgatgaggactgcggtcttcggaccactctg
gaggcgtcgctggagctgcggagtctgggccgcgtggccgacaatgcccagcagcagtac
atgcgctctcgaccggcgccctcacctgagtctatcaagagggccaaagagttggacctt
gctgggctgggcctgcaccccctcttcagctcacacttccaggaggaggagctgcagcag
ctgcagctggtagacagcattaggaactaccgctcccgcacgaccatctttgagatcaat
gcctccagccgggacctgagcagccaggtgatgcgtgccaagaggcagaaggaccgaaaa
gccattgccagattccagcaggggcggcaggagcggcaggagagcccagccggcccagcc
ctgagcctccaggcaccaccggaagagcagcctgaggaggaggagaaggaggcagcagga
gagagtgtagaggacgtcttcacagaggtcgtgggccagaagcggcagaagccaggacct
gaccggggagccaagaggcggagggaggaggcccggcagcgggaccaggcgttctacgtc
ccctaccggcccaaggacttcgagagcgagcgaggcctgagtgtcggtggggacggggga
gcctttgagcagcaggcggctggtgctgtcctggacctgatgggggacgaagcccagagt
ctgaccaggggccggcagcagctcaagtgggaccggaagaagaagcggtttgtgggacag
tcaggacaggaggacaagaaaaagatcaagacagagagtggccgctatatcagcagctcc
tacaagcgggacctataccaaaagtggaaacagaaacagaaaatcgatgatcgtgactca
gaagaggaaggggcttttgaccggcgaggcccagagcgaagaggtgggaagcatggccga
gggcaaggtgcatcccaaccccgcacccctggcacccccgcaggccgagtgcgctcagag
ctcaagaccaagcagcagatcctgaagcagcggcgccgagcccagaagctgcgcttcctc
cagcgtggtggcctcaagcagctttctgcccgcaaccggcgccatgcccaggagctgcag
cagggtgccttcggccggggcgcccactctaagaagggcaagatgaggaagaagatgtaa
DBGET
integrated database retrieval system