Sus scrofa (pig): 100525727
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Entry
100525727 CDS
T01009
Symbol
FAN1
Name
(RefSeq) fanconi-associated nuclease 1 isoform X4
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100525727 (FAN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssc03400
]
100525727 (FAN1)
Enzymes [BR:
ssc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
100525727 (FAN1)
DNA repair and recombination proteins [BR:
ssc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
100525727 (FAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
Fan1_SAP
VRR_NUC
FAN1_HTH
zf-WRNIP1_ubi
FANC_SAP
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
100525727
NCBI-ProteinID:
XP_003121714
Ensembl:
ENSSSCG00000004845
UniProt:
A0A480X1H8
A0A4X1U9L3
LinkDB
All DBs
Position
1:complement(143919695..143961678)
Genome browser
AA seq
1020 aa
AA seq
DB search
MMSVGKSAKKRPCRSLSISKTKKNESNSIISFFNNVPPAKLACPVCSKMVPRYDLNRHLD
EMCADNGDITPGDPGHIGLASSNVSTVDVTNTALEDVMPEKSSPSKMNLTPGQSDSAKTG
MKKKTSPYFKNNDDLVGRNQDELRHLNVKVISLGSLSSKLSRRYIKAKRSIGKSEGLANQ
SPQSSSSSVVKSLVENHSEIEDQGQLLENSSQKENMFTYDSLEEPHTPEGTKVMEIEDQK
PTEECRSSLTLAFSDNTPVLISPDLTLGNALKSTLEDGLSKPESIKGVDGKGVAKCGAGD
CEEVKMTLVSEAKTQMSHWEAKSPSSKHDASNWSNIQALPLEDDSSSKNEVTHRIPLEQG
LSCDVSSVTCPVPLDYPYYLRNFLMVLKAVFENEDDGMLFDEHEKGIVTTFHQLSASGQK
LYVRLFQRKFGWIKMNKLEYEEIASDLTPVVGELTQAGFLQTESELQELSEVFELLSAPE
LKTLAKTFHLVNPHGQKQQLVDALLKLAKQPSVCTWGKNQPGIGAVILKRAKDLAGQSLR
VCRGPRAVFSRILLLFSLTDSVEDEEAACGGQGQLSTVLLVNLGRMEFPRYTINRKTQIF
QDRDDLIRYAAATHMLSDISAAMANGAWEEARALSECAKRDWDRLKDHPSLRYHENLPPF
LRCFTVGWVYTRILSRTVEILQRLHLYEEAVRELENLLSQNVYCPDSRGRWWDRLALNLH
QHLKRLEPAIRCIEAGLSDPEVRTGHRLSLYQRAMRLRESPSCQKYRHLFRHLPEITVED
VEHVTITGRLCPQHGIAKSVFVMEAGGATPATVLCSVEELALAHYRRCGFDQGIHGEGST
FSTLYGLLLWDIIFMDGIPDVFRNAYQAFPLDLCTDSFFESRALAIEARLQQIHSASVES
LRAWVAATWQAQEGRVASVVSWERFASLQQAQDLVSCLGGPVLSGVCRRLAVDFRHCRGG
LPDLVVWNSQNHRFKLVEVKGPNDRLSHKQMIWLDELRRLGAEVEVCHVVAVGAKSRGPD
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcagtggggaaatctgccaaaaaaagaccttgtagaagtttatcaataagcaaa
actaaaaaaaatgagtctaactctattatttcattttttaacaatgtaccgcctgccaaa
cttgcctgccctgtttgtagtaaaatggtgccaagatatgacctaaacaggcaccttgat
gaaatgtgtgctgacaatggtgacatcactccaggggacccagggcacattggcttagca
agttcaaatgtgtccacagtagatgtaaccaatactgctttagaagatgtaatgccagag
aagtcatcaccatcaaagatgaatttaacccctggccaaagtgactcagcaaaaacgggc
atgaaaaagaagaccagcccctactttaagaataatgatgacttggtgggcagaaatcaa
gatgaactgagacatcttaatgtaaaagtcatctctctgggaagcctgtcatctaaattg
tcccgaagatacataaaggctaaaagatcaataggtaagagtgagggacttgccaatcag
agtccccagagttcctcatcctcagtggttaagagcctggttgaaaaccattcagagatt
gaggaccagggtcaacttttggagaatagttctcaaaaggaaaacatgtttacctatgat
tctcttgaggaaccacatactcctgaaggcactaaagtaatggaaattgaagaccaaaag
cctaccgaggaatgcagatcaagcctcacccttgcattttcagataacactcctgtgtta
atttcaccagatttaactcttgggaatgcattaaagtctactttagaggacggcctttca
aagccagagagtatcaaaggagtagatggtaaaggtgttgcgaaatgtggggcaggtgat
tgtgaagaggtgaaaatgactcttgtttcagaagctaaaacacagatgtcacattgggag
gcaaaatctcctagctctaagcacgatgcttctaattggagtaacattcaagcacttcct
ctggaagacgacagcagctcaaagaatgaagtcacacacagaattcctttggagcagggg
ttaagctgcgatgtttctagtgtaacatgtccagtacccttggattatccttactacctt
cggaatttcctcatggtgctgaaagccgtgtttgagaatgaagatgatgggatgctcttt
gatgaacatgagaagggaattgtgactacatttcatcaattatcagctagtggtcagaag
ctatatgtaagactttttcaacgtaaatttggctggattaagatgaataaattggaatat
gaagagattgcctctgacttaactcctgtggttggagagttgacacaagccggctttctg
cagacggaatctgagttgcaagaactctcagaagtgtttgagctactttctgctccagaa
ctaaaaaccctggcaaagaccttccacttggtgaatccccatggacagaaacagcagctg
gtggacgctcttctcaagctggccaaacagccgtcagtctgtacttggggcaagaaccag
cctggcattggtgcagtgattttaaaaagagctaaagatttggctggacagtcgctgaga
gtctgtagaggccctcgggctgtgttttcccggatcctgctgctgttttcattgactgat
tccgtggaagatgaggaggctgcctgtggcggtcagggccagctttctactgtcctgcta
gtcaaccttggccgcatggagtttcccaggtacaccatcaatcggaaaacccagatcttc
caagatagagatgatcttatcagatatgcagcagccacacacatgctgagtgacatctcc
gcggcaatggccaatggggcctgggaggaagccagggcgctctctgagtgtgcaaaacgg
gattgggacagactgaaagaccacccttccttgaggtaccatgagaatttaccacccttt
ctccggtgttttactgtcgggtgggtttatacaaggattttgtcccggaccgttgaaata
ctgcagagacttcacctgtatgaggaagctgtcagggagcttgaaaaccttttgtctcag
aatgtgtattgtcctgacagcagaggccggtggtgggaccgcctggctctcaacttacac
cagcacctgaagcgcctggaaccggccatcagatgcatcgaggcagggctctcggaccca
gaggtgaggaccggccaccgtctctctctgtatcagagagccatgcgcctgcgggagtct
ccaagctgccagaagtaccgacacctctttcgtcaccttccagaaatcactgtggaagac
gttgagcatgtgaccatcacgggccggctgtgcccgcagcatgggatagccaagtctgtc
ttcgtaatggaggctggaggagccacccctgccacagtcctgtgctctgttgaggagctg
gcgctggcccactatagacgctgtggcttcgaccaagggattcatggggaggggtccacc
tttagcacgctgtatggcctcctactgtgggacataatcttcatggatgggattcccgac
gtcttcagaaatgcctaccaggcgttcccgctggacctgtgcacggacagcttcttcgag
agcagggcgctggccatcgaggccaggctgcagcagattcacagtgcctctgtggagagc
ttgcgggcctgggtggcagccacctggcaggcccaggaaggcagggtggcctccgtcgtc
agctgggagcgctttgcttctcttcagcaagctcaggatcttgtttcctgcctggggggc
cctgtccttagtggggtgtgccggcgcctggctgtggacttccggcactgccgagggggc
ctccctgacctggtggtgtggaactctcaaaaccatcgctttaagctggtggaagtgaaa
ggtcccaatgaccgtctttcgcataagcagatgatttggctggatgagctgcgcaggctg
ggggctgaggtggaggtctgccacgtggttgcagttggagccaagagcaggggccctgac
tga
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