Sus scrofa (pig): 100623088
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Entry
100623088 CDS
T01009
Symbol
ARHGEF40
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 40
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100623088 (ARHGEF40)
Membrane trafficking [BR:
ssc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100623088 (ARHGEF40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
DUF5610
PH_10
Motif
Other DBs
NCBI-GeneID:
100623088
NCBI-ProteinID:
XP_020954966
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All DBs
Position
7:complement(78043995..78067546)
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AA seq
1518 aa
AA seq
DB search
MEPEPVEDCVQSTLAALYPPFEATAPTLLGQVFQVVERTFREDALRYTLDFLVPAKHLLA
KVQQEACAQYSGFLFFHEGWPLCLHEQVVVQLAALPWQLLRPGDFYLQVVPSAAQAPRLA
LKCLAPGGGRVQELPVPNEACAYLFTPEWLQGINKDRPTGRLSTCLLSAPSGIQRLPWAE
LICPRFVHKGGLMVGHRPSTLPPELPPGPPGLPSPPLPEEALGTRSPGDGHNAPAEGPEG
EYVELLEVTLPSRGSPMDAEGSSGLSRTRTVPTRKGAGGKGRHRRHRAWMHQKGLVSRDQ
DGARPPGEGSSTGASPGSPPGAEALPEAAALELSEPPEETLGEASESCPLKPGEVGGGAG
QGAEGPPGTPRRTGKGNRRKKRAAGRGALNRGGDSAPLSPGDKEETSHQEALVSLSPPNE
HELPGCNPVKEEQEGSGKPESEPKEELKPAEEKEPRPLEDCGPVEERTREREQEGPSLVC
VAGPTDPEGLPSDPPAPSLETVQEVKGDSIPEEAPPGSISDDPGVAWDLMASGFLILTGG
VDQSGRALLTITPPCSPEEPPPSQEALSTALHYLHSLLRPDLQILGLSVLLDLRKAPPLP
PALISVLSRLQDSGDPPLIHRLLLLTHDNPPTELHGLQGAELLSESDLKRVARPEELQWD
LGGHREPSPSHWVETHQEVARLCRLCQGVLGSIRQAIEELEGAAEPEGEEVVGMPEPLQK
VLADPRLTELQRDXGAILMRLRSTHSSKLEGPGPATLYQEVDEAIHQLVRLSNLHVQQQE
QRQRLHQLQQVLQWLSGPGEEQLASFTVPGDSLSALQESELRFRAFSAEVQERLAQAREA
LTLEEETASQRVLDIFEQRLEQAESGLHRALRLQRFFQQAHEWVDEGSARLAGAGPGREA
VLAALALRRAPEPSAGTFQEMRALALDLGSPAALREWGRCRARCQELERRIQQQLGEEAS
PRGHRRRRADSASSGGXQRGPHSPSPSLSSLLLPSSPGPRAAPSHCSLAPCGXDYEEEGP
ELTPEAEGRPPRTVLIRGLEVTSTEVVDRTCSPREHVLLGRAGAPEGPWGVGTPRMERKR
SISAQQRLVSELIACEQEYVGTLSEPVPPPGPELTPELRGTWAAALSARERLRSFHRTHF
LRELQGCATHPLRIGACFLRHGDQFSLYAQYVKHRHKLENGLAALGPLTKGSVEGGPHLP
RALQQPLEQLARYGRLLEELLREAGPEPSSERQALGAAVQLLREQETRGKDLLAVEAVRG
CEIDLKEQGQLLHRDPFTVICGRKKCLRHVFLFEHLLLFSKLKGPEGGPETFVYKQAFKT
ADMGLTENIGDSGLCFELWFRRRRAREAYTLQAASPEIKLKWTSSIAQLLWRQAAHNKEL
RVQQMVSMGIGNKPFLDIKALGERTLSALLTGRAARTRASVAVSSFEHAGPSLPGLSPGA
CSLPARVEEEAWDLDVKQISLAPETLDSSGDVSPGPRNSPSLQPPHPGSSTPTLASGGIL
GLSRQSHARALSDPTTPL
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgagccagtggaggactgtgtgcagagtactctggccgccctataccctccc
tttgaggcaacagctcccacactgttgggccaggtgttccaggtggtggagaggactttt
cgggaggatgcgctgaggtacacactggacttcctggtgcccgccaagcacctgcttgcc
aaggtccaacaggaagcctgtgcccagtacagcggtttcctcttcttccatgagggctgg
cccctctgcctgcacgagcaggtggtggtgcagctcgcagccctaccctggcagctgctg
cgcccaggagacttctacctgcaagtggtgccttcagcagcccaagcaccccgcctggca
ctcaagtgcctggccccagggggtgggcgggtgcaggagctgcctgtgcccaatgaggcc
tgtgcttacctgttcacacctgagtggctgcaaggcatcaataaggaccggccaacaggt
cgcctcagcacctgtctgctatctgcaccctctgggattcagcggctgccctgggctgag
ctcatctgccctcgatttgtacacaaagggggcctcatggttggacatcggccaagcaca
ttacccccagaacttccccctggacctccagggctccccagccctccactccctgaggag
gccctgggcacccggagtcctggggatgggcacaatgcccctgcggaaggacctgagggc
gagtacgtggaactactggaggtgacacttccttcaagggggagccccatggatgctgaa
ggctcctcaggcctctccaggacccgaacggtacccacacgcaagggtgctggaggaaag
ggccgacaccggagacaccgggcatggatgcaccagaagggtctggtgtctcgggaccag
gatggagcacgcccacctggtgaagggagcagcactggagcctcgcctgggtctccccca
ggagctgaggctctcccagaggcagcagccctggagctatctgagcccccagaagagaca
ctgggggaagcctctgagtcttgccccctgaagccaggggaggtcggaggaggagcaggc
cagggggctgaagggccacctggcacccctcggagaacaggcaaaggaaacaggagaaag
aagcgagctgccggcagaggggctctcaaccgaggaggagacagtgccccactgagtcct
ggggacaaagaagagactagccaccaggaagctcttgtcagtctgtccccaccaaatgaa
cacgagcttccaggatgcaacccagttaaggaagagcaggaaggctcagggaagccagag
tctgagccaaaagaggagctcaaaccagcagaggaaaaagagcctcggcccctggaagac
tgtgggcctgtagaagagaggaccagagaaagagagcaggagggacccagcctggtgtgt
gtggcaggacccaccgatccagaagggctcccgtctgaccccccagcaccatccctcgag
actgtgcaggaagtaaaaggggacagcatcccagaagaggctcctccaggctccatctct
gatgaccctggtgtagcttgggacttgatggcctctggattcctcatcctgactggaggg
gtggaccagagtgggcgagccctgctgaccattaccccaccgtgctctcctgaggagccc
ccaccctcccaagaggcgctgagcactgctcttcattacctgcactcactgctcaggcct
gatctacagatactggggctttccgtcctgctggaccttcgcaaggcacccccactgcct
ccagcactcatttctgtcctgagtcgacttcaggactcaggagatcctcccctcattcat
cggctgctgcttctcactcatgataaccctccaactgaactccatggacttcagggtgct
gagctgctgtcagagagtgatctgaaaagagtggccaggccagaggagctgcagtgggac
ttgggaggtcacagggagccctctccaagccactgggtagagacacaccaggaagtggca
aggctgtgccgcctgtgccaaggtgtgctgggctctatacggcaagccattgaggagctg
gagggagcagcagagccagagggagaagaggtggtaggaatgcctgagcccttacagaag
gtactggcagatccccggctgacagagctgcagagggatnggggagctatcctgatgagg
ctgcgctccactcacagcagcaagctggagggcccaggcccagctacactgtatcaagag
gtggatgaagccattcatcagctcgtgcgcctctccaacctacatgtgcaacagcaggag
cagcgacaacgcttgcaccaactccagcaggtgctgcagtggctctcaggcccaggggag
gagcagctggccagcttcactgtacccggggactccctgtctgccctgcaggagtcagag
ctacgatttcgggctttcagcgctgaggttcaggagcgcctggctcaggcacgggaggcc
ctgaccctggaggaggaaactgcctcccagagggttctggatatttttgaacagcgccta
gagcaggctgagagtggcctccatcgggctctgcggctacagcgcttcttccagcaggca
catgaatgggtggacgaaggttccgcgaggctagcaggagcagggccagggcgggaggca
gtactggcagccctggccctgcggcgggccccagagcccagcgctggcaccttccaggag
atgcgggccctggcactggacctgggcagcccggcagccctacgagaatggggccgctgc
cgggcccgctgccaggagctggagaggaggattcagcaacagctgggagaggaggcgagt
ccacggggccaccgacgacgacgggcagacagcgccagcagcggagggncccagcggggc
ccccacagcccctcacccagtctcagctccctgctgctccccagcagtcctgggccacgg
gcagccccgtcccactgctccctggccccctgtgggnaggactatgaggaagagggccct
gagctgactccagaggcagagggcagaccgccgaggaccgtgctgatccggggcctggag
gtcaccagtaccgaggtggtagacaggacgtgctcaccccgggaacatgtgctgctgggc
cgggccggggcgccggaagggccctggggagtaggcaccccccggatggagcgcaagcga
agcatcagcgcccagcagcgcctggtgtctgagctgattgcctgcgagcaggagtacgtg
ggtaccttgagtgagcctgtgccaccccctgggcctgaactgacccctgaactgcggggc
acctgggctgctgccctgagtgcccgggagaggctccgcagtttccaccggacgcacttt
ctgcgggagcttcaggggtgtgccacacaccccctgcgcattggggcctgcttccttcgc
catggggaccagttcagcctttacgcccagtacgtgaagcaccggcacaagttggagaat
ggtctggctgcccttggccccctaaccaagggctccgtggaggggggccctcacctgccc
cgggccctgcagcagcccctggagcagctggccaggtatgggcggctcctggaggagctc
ctaagggaagctgggcctgaaccaagttctgagcgccaagctcttggggctgccgtgcag
ctgctccgagaacaagagacccgtggcaaagacctgctggctgtggaggcggtgcgtggc
tgtgagatagatctgaaggagcaggggcaactcctgcatcgggaccctttcacagtcatc
tgtggccggaaaaagtgccttcgccatgtctttctttttgagcatctccttctgttcagc
aagctcaagggtcctgaaggggggccagagacttttgtttacaagcaggcctttaagact
gccgacatgggactaacagaaaacattggggacagtgggctctgctttgagttgtggttt
cggcgacgtcgtgcacgagaggcgtacactttgcaggcagcctcaccagagatcaaactc
aagtggacaagttccattgctcagctgctgtggagacaggcagcccacaacaaggagctc
cgagtgcagcagatggtctccatgggcattgggaacaaacccttcctggacatcaaagcc
cttggggagcggacgctgagtgccctgctcactggaagagccgcccgcacccgggcctcg
gtggccgtgtcttcctttgagcatgccggcccctcccttcccggtctctccccgggagcc
tgctccctgcctgcccgcgtcgaggaggaggcctgggatctggacgtcaagcaaatttcc
ctggcaccagaaacacttgactcttctggagatgtgtccccaggaccaagaaacagcccc
agcctgcaacccccacaccctgggagcagcactcccactctggccagtggagggatctta
gggctatcccggcagagtcatgcccgagccctgagtgaccccaccacgcctctgtga
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