Sus scrofa (pig): 100623296
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Entry
100623296 CDS
T01009
Symbol
RTTN
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
100623296 (RTTN)
Cilium and associated proteins [BR:
ssc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100623296 (RTTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
Motif
Other DBs
NCBI-GeneID:
100623296
NCBI-ProteinID:
XP_020954904
LinkDB
All DBs
Position
1:152688305..152833969
Genome browser
AA seq
2246 aa
AA seq
DB search
MVLTGLIRKLGHQLAEIRERALRNILCKVEHNLICCADLVQERLLFLHLLEWFNFPSVPM
KEEVLSLLNRLVKYSPAVQHLVDLGAVEFLSKLRSNVEPDLQAEIDGILDGLFVLPSEVP
ELYSASDQTSQTGNSLKSSDEIKLPQQPEILTGYFPQDKSSFQLEVPPQPVAANPTVKCL
KFSTFPWLPLTTADRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIV
QSLLSLLKLAFGGEGKHRLALQSVSCLQQLCVYLRNRLNFHRDPSFFSSKQDTVSQNSSL
SYCHEARVTHHSQNPSPGSSSPRPSVVGRTGQRPRGDGQDWDAVSSSGSSSHAHVNSRVS
VHSPLDVVHLGLPGLEAEDALELRFQQLSLPQFCISILESAVPLLKTGSRQMIIRVLELL
AEDMILIGEAISADIWDDSSLFAIDMKEKLLTVLGSLGDTMCYHKNSISLEQPEAVLVHH
RMAFVSISLFAVRLLQTLLPVEKASHFLPEPMSAALFLVSLDMPVSLEYPNIHEAVVAYL
EQLNSENYSIYKRTAEAIYSIECTCNFLYDVGKEGEKNLLELVELADQALRSFSYHQHFP
LVKEIIFICSKIWKSAQASPLLQGESQKVFLRMLSHPLLQVKVKTYHCCLEVIKECLGIH
NVSKPVSSLCNGIHFLLHPKVLYEISAFGIQEPKSEVSAAAKAILMHLLQGRLMMTALTW
NKFIESLCPVIPVLQGYADTEDPLGNCILLLSKASSEDGEGALPCTTRLRSMLRLLLVKK
PSVRVLALKLLACHLTREEGADTKRPSIDATILSRVTNLFIVKKPIELKLDDRRELIIKL
ETVEKVYEIFISDDIDLVLRKSAAEQLAVIMQDIKMHAVVKKLQLIDKIIEYLNECVGQD
GEVVECLVQPSLTLLRKVLCADPAIRVSLSQESSLLTLLFRVSLIFHEDCTVVTEVGALF
CLLLFDEVSRMDMWSDNPSNKPSSPSVFSLPVSVSRRYHLPVLVLGHHAVSPYSIVLPLS
ADCLALKPVSDMLRIAWNLSWYHGSDNLLKQMNSETKIQEFLDSLKLSTEDALTLKMTYT
ASGLKDCLHSIAQAAAHREVRTAVTRMSFYLLNDRLSFTGGTGPCGVTLKSLSWHNTLNR
FLQVLPACTEDEKLLIDIIHFLNKLLKEQRKNVSVELLNWILELLLRHSPNPLLDLLVLT
ESQAREETDDIRTAVRQQLQKELMALFNTLLLSFVAVTDRKCLELFYVFQTQLALKLLQC
LRVTDAPHFYGLPSLERTLRGMAHLTAFPGWSSHSPLTKPLEICVKYLSGLLEVITSFYV
ERGGNAMSFMGKGVTKSTVLCLLHLSHEMMAQAQSSEWMSLWFLPLGGHSEEHVPTQQGL
AWLIPLWVDRDPEVRFTSLGLGSALTTLETGCVALANSCQNISGGLWGTVLNILLDQSEC
SMVRREAAFIFQNLLVIPMPSVVIKDYTWQGPCVHDEDSGLSLIGKPALQALLYHCHFYE
HLNQMVKHCYLGRYKFDLNCSALNGTSEGNDINGLDDSFKFWRAPSRLSNQDQDPSSLST
SETMVATSSESAELQLPGLSTAPLPEAPHDQFVTQVIGQHETASPQLLPDSSISAPLPRQ
CVFVTPPLLSAMCSLLDSLLVTAPRDTANALQQTHLIELLCSMADASLIEISVQELQGLL
PVSPPVEHTQAQVSFLLEYLSSLSRLLQSCLLVDPDLVIQDELLKPLITNIIRVLTICTK
DILDVEVISAFYQTWTHLFNLLAALLRKAGPASFPSITMGLARYWAAVIDVFCKCVGLSI
TCPTLYTASLQFLSILLTEEAKRYVQDKDKTSLCRNLTMASLLDKTQENQKSLEQLNEAI
LQCYEGKSSKDILKRVAANALMSLLAVSRRAQKHALKDFGLSAHLIDSCVERMKHIHAQL
NLDSLRPGRAALKKKEDGFVKELSIAMQLLRNCLYQNEECKEAALEAHLIPVLHSLWPWL
LMDDSLMQIALQLLCVYTANFPNGCSSLCWSSFGQYSAPAAHRGAPSSSLMLCILKLAAQ
VPLENTSVQQLVFMFLSNLALSHDCKGVIQKSNFLQNFLSLTLPKGGNKHLSNVTVLWLK
LLLNISFGEDGQQMILRLEGCLDLLTEMSKFKHKSSPYIPLLIFHNICFNPANKPKILAN
EKVISLLAACLESENQSAQRIGAAALWALIHNYQKAKTTLKNPSIKRRVDEAYSVAKKTF
SNSEESPLNAYYLKCLENLVQQLNSS
NT seq
6741 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgaccgggctcatcaggaaactcggtcatcagctggccgagatcagggaacgc
gcccttaggaatattctctgcaaagttgagcacaacttaatttgttgtgctgatctagtt
caggagaggctacttttcctccatttgctggaatggttcaatttcccgtctgttccaatg
aaagaagaggttctgagcctgttgaacagattggttaagtattccccagcagtccagcat
ttggttgatcttggtgcagttgaattcttatcaaaacttcgttctaatgtggagccggat
ctgcaggctgaaattgatggcattctggatggactttttgttcttccttcagaagttcct
gaactgtattctgcatctgatcaaaccagtcaaactggtaactctttgaaatcgtctgat
gaaatcaaattgccacaacagcctgaaatcttaacaggatattttcctcaagacaagagt
agtttccagctggaagtgcctccacaacccgtggcagcaaatccgaccgtgaagtgcctg
aagttttctaccttcccttggctccccctgacaacagctgataggcatgttctctcctct
aatgaaagctctttaagaagtagtaaccacactttaatctggaatacctgtgaactattg
aaagatgttatcatgcaagattttcctgctgagattttccttcaaaggccaaaaattgtt
cagagcctcttatctctgttgaaactggcctttggaggagaaggaaaacatcgcctggca
ttacagtcagtttcctgcttgcagcagttgtgcgtgtatttaagaaacagacttaacttt
caccgagatccaagttttttctctagtaaacaagatacagtttcccaaaattcttctctg
tcttattgtcatgaagcaagagttactcatcattcccagaatccttctcctggaagcagt
agccctcggccttctgtggttggacgcacaggccagcgacccagaggagatggccaggat
tgggatgcagtgtcttccagtggaagtagcagtcatgctcatgtcaactcaagggtgtct
gtccattcacctttggacgtggtgcatctgggcctgccagggctggaagctgaggatgcc
ctggagctgcgattccagcagcttagcctgcctcagttctgcatctccatcctggaatcc
gctgttcccctcttaaaaacaggtagtagacagatgataataagagttctggaactgctt
gcagaggatatgatacttattggtgaagcaatttcagcagatatctgggatgacagcagc
ctttttgctatagatatgaaggagaaacttctcacggtgttgggatcccttggggacacc
atgtgctaccataagaacagcatcagtttggaacaaccagaggcagtgctagtgcaccac
aggatggcctttgtcagcatctcgctgtttgcagtccgactcctgcagacgcttctccct
gttgaaaaggcaagccactttttaccggagcctatgtcagctgcattatttctagtttct
ttggacatgcctgtttctttggaatatccaaatattcacgaagctgttgtggcctatttg
gaacagctgaattctgaaaactacagtatttataaacgaactgcagaggccatttattca
attgagtgtacctgtaacttcctgtatgatgttggaaaggagggagagaagaatctctta
gaattagtggagctggcagaccaagccttacgtagcttttcctatcatcagcatttccct
ctagtaaaggaaatcatcttcatttgttcaaagatctggaaatctgcacaggccagtcca
ttactacaaggagaaagtcagaaggtgtttctgcgtatgttgtctcacccattgctacaa
gtgaaagttaaaacttaccactgctgtctggaagtaattaaggaatgtttaggcatccat
aatgtcagtaaacctgtgtcttcactttgcaatggaattcattttctacttcacccaaaa
gttctgtatgaaatctcggcatttggcattcaagagcccaaaagtgaggttagtgctgct
gccaaggccatcctgatgcatctgctgcagggacgcttgatgatgacagcattgacctgg
aacaagtttattgagtccctgtgtcctgtcatcccagtactgcagggctatgctgacaca
gaagatcctttgggtaactgtattctcctcctaagcaaagcgagttctgaggacggtgaa
ggggctcttccctgcaccacccggttgagatccatgctgcgactcctgctggtgaaaaaa
ccctcagtccgggtgctggcattaaagcttttagcatgtcaccttacaagggaagagggg
gctgataccaagcgcccttcaattgatgccacaattctctccagagttactaatttattt
attgtgaaaaaacctattgaactcaagttggatgacagaagagaactgattattaagttg
gagactgttgaaaaagtatatgaaatctttatctcagatgatattgatcttgttttgaga
aagtcagccgcagagcaattagctgtgattatgcaagatattaagatgcatgctgtggtg
aaaaaattacagctaattgacaagataattgagtatttgaatgaatgtgttggtcaggat
ggtgaggtggtagaatgtttggtacagccaagtctcacgctcctgaggaaggttctttgt
gcagacccagccatacgtgtttccctctcacaagagtcttctctcttgaccctgttattc
agagtttccttgatatttcatgaagattgtactgttgtcactgaagttggagcattattt
tgtcttctgttatttgatgaagtatcaagaatggatatgtggtctgataatccttccaat
aaaccttcttcaccatcagtcttcagtctgcctgtttcagtttctagaaggtatcaccta
ccagtccttgtacttggccaccatgctgtgagtccatactccatagttttgccattatct
gctgattgtttagccttgaagccggtctcagatatgctgagaatagcttggaacctatca
tggtatcatgggagtgataatctgttgaagcagatgaactctgaaactaaaatccaagaa
tttttagattcattaaagttatccactgaggatgcccttactctgaagatgacatacaca
gccagtgggctgaaggactgtctccactccattgcgcaggctgcagcccacagggaagtg
aggactgctgtcacaaggatgagtttttatcttctgaatgacagattgtccttcacgggt
ggcactggcccatgtggggttaccttgaagtccttgtcttggcacaacacactaaacagg
tttttacaagtgcttcctgcttgcactgaagatgagaaactgctaatagacatcatacat
tttctaaataagttattgaaggaacaaagaaaaaatgtgtccgtagaacttctaaactgg
atcctagaattacttcttagacatagtccaaatccactcttggacctgctggttctgaca
gagtcacaggcacgagaggaaacagatgacatccgcacggctgtcaggcagcagctccag
aaagaattgatggctcttttcaataccttgctgctcagtttcgtggctgttactgacagg
aaatgcttggaacttttttacgttttccaaacgcagctggctctgaaactgctccagtgc
ctgagagtaacagatgcccctcatttctacgggctgccctcacttgagaggactttacgt
gggatggcccacctcacagcatttcccggatggagctcacactctcctctcacaaagcca
ctcgaaatttgtgtgaagtacttgtcaggtctcctcgaagttattacttctttttatgtg
gagcgtgggggaaatgctatgtccttcatgggaaaaggtgtcacaaagagcacggttctt
tgcttgcttcacttatcccatgagatgatggcccaggcccagagctcggagtggatgtca
ctttggttcttgcctttaggtggtcatagtgaagaacacgtgcccactcaacaggggttg
gcttggttgattccactgtgggttgatcgagacccagaggtgaggttcacttcactggga
ttaggatcagcactgaccacccttgaaactggctgtgtggctttggcaaatagctgtcaa
aacatttctggtgggctctggggaacagtgctgaacattcttctggaccagtcagaatgt
agcatggtgcgccgggaggctgcatttatttttcagaatctccttgtaattccaatgcct
tcagtagttataaaggattatacttggcagggcccttgtgtccatgacgaggactctgga
ctgtcactcataggaaaacctgcccttcaggctcttttatatcactgccatttttatgaa
catttgaatcagatggtaaaacattgttacctaggacgatataagtttgatttgaattgt
tctgctttaaatgggacttctgaaggcaatgatataaatggtttagatgactcattcaag
ttttggagggctccatctaggttgtccaatcaagatcaagatccaagttctctctccacc
tcagaaacaatggtggcaacttcatcagagagtgccgagcttcaactgcctgggctctcc
acagcacctctccctgaagccccgcacgaccagtttgtgactcaagtaataggtcagcat
gaaactgcatctccacagcttcttcctgattcatccatttctgctcccctgcccagacag
tgtgtttttgtcactccgcctcttctttcagccatgtgcagcctcttggacagcctcttg
gtgactgctccaagagataccgcaaatgccctccaacaaactcacctcatagagcttctc
tgtagtatggcagatgcctctctcatagagataagcgttcaggagctccagggcctgctg
cctgtgtcaccacctgttgagcacactcaggctcaggtgtcctttctcctcgaatacctg
tcctctttgtccaggcttcttcagtcatgtttattggtagatcctgaccttgtgattcag
gatgaacttctgaaacctcttatcacaaacatcatcagagttctcaccatatgcaccaaa
gatatattggatgtagaggtaatatcagctttttatcagacatggacacatttatttaat
cttctggctgcactcctgaggaaagctggccctgcctctttcccgtctatcacgatgggt
ctggccaggtactgggcggcagtgattgatgtgttctgcaagtgtgtgggtttgtccatc
acatgccctaccctatacactgccagcctgcagtttctttctattcttttgactgaagaa
gcaaaaagatatgtccaggataaggataaaacaagtttatgtcgcaatctgacaatggct
tcacttcttgataaaactcaggaaaatcagaaatctctagaacaacttaatgaagcaatt
cttcagtgctatgaaggaaaatcctccaaagatatcctgaaaagagttgctgcaaatgca
ttgatgtctcttctggctgtcagtagaagagcacagaaacatgctttgaaggattttggt
ctttcagcccacctgatagacagctgcgtggagcgaatgaagcacattcatgcacagctg
aacctggattctctgaggcctgggagggcagccctgaagaaaaaggaggatggttttgtt
aaagagttaagcattgccatgcagctcctaagaaactgtctttatcaaaatgaagaatgt
aaagaagcagctcttgaagctcatcttatccctgtcttgcactctctctggccttggctt
ttgatggatgattcactgatgcaaattgccctgcagctgctttgtgtctatactgcaaat
tttccaaacggttgcagttctctctgttggtccagttttggacagtattctgctccagct
gcacaccgaggggcccccagtagctccctgatgctgtgtatcctgaagttggctgcccag
gtgcctctggagaacacctcagtccagcagttggtttttatgtttctctcgaacctggcc
ttgtctcatgactgtaaaggggtaattcaaaagagtaacttcttacagaactttctatct
ctaacattgccaaaaggaggaaataagcatctcagtaatgtgaccgttctttggttgaag
ttactcctgaatatatcatttggagaagatgggcaacaaatgattctgaggcttgagggc
tgcttggacttactcacagagatgagcaaattcaagcataagagcagcccttatataccc
cttcttatttttcataacatttgcttcaatcctgccaataagcccaagatcctggccaat
gaaaaagtcattagcctgctagctgcctgtctggaaagtgagaatcaaagtgctcagagg
attggagcagctgcgctttgggctctgattcacaattaccaaaaggcaaaaacaactttg
aaaaatccatcaataaaaagaagagtggatgaagcatattctgtagcaaagaaaactttc
tcaaactcagaagaaagccctctaaacgcctattatttgaaatgtcttgaaaaccttgtg
cagcaacttaactcttcctga
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integrated database retrieval system
