KEGG   Sus scrofa (pig): 100626381Help
Entry
100626381         CDS       T01009                                 

Gene name
LIG3
Definition
(RefSeq) DNA ligase 3
  KO
K10776  
DNA ligase 3 [EC:6.5.1.1]
Organism
ssc  Sus scrofa (pig)
Pathway
Base excision repair
Module
BER complex
Brite
KEGG Orthology (KO) [BR:ssc00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    100626381 (LIG3)
Enzymes [BR:ssc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     100626381 (LIG3)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     100626381 (LIG3)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
12
AA seq 995 aa AA seqDB search
MNLAFKIIFPPTLRLLSRKKLCLFQEQHHWPDKRQFSQWSETGLRRHHLLQRRKPVLSFQ
ESSLRPRATCLVFLPGSHVGLCGGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIG
KVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDPEKEQISQH
IADLSSKAASTPKKKAVVQAKLTATGQVTSPVKGASFVTNTNPRKFSGFSAKPNNSGEAR
SSPTPKASLSSSKCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQDFLQKGSGGDGFH
GDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNSDDMARDLEQGDVSETVRVFFEQ
SKSFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDL
KMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGQRRALSVQASLMTP
VQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHKVAH
FKDFIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYF
NDVSLMDRPLCGRRKFLHDNMVEIPNRIMFSEMKQVSKASDLVDMINRVIREGLEGLVLK
DVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPSS
QKWCTVTKCAGGHDDATLARLQTELDMVKISKDPSKIPGWLKINKIYYPDFIVPDPKKAA
VWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKERAAFAL
VAGDEGSSTTGGSSGENEGPSGPAVSHKVPRASPNGKKAGGKLSSSNSKGGGKLAAKPSP
VKVGEKRKAPDETPCQAKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAFDGDLVQEFDVAS
ATHVLGSRDQNPAAQQVSPEWIWACIRKRRLLAPC
NT seq 2988 nt NT seq  +upstreamnt  +downstreamnt
atgaatttggcttttaagatcatcttcccaccaactctccgtctgctcagccggaaaaaa
ctgtgcctgttccaagaacaacatcactggcctgacaaaagacagttcagccagtggtca
gaaacaggtctgcgcagacaccacctcctccagagaagaaagcctgttctgtcattccag
gaaagcagtctcagaccacgtgctacctgccttgttttcttgccagggtcgcatgtggga
ctctgtggtggcccctgtgagatggcagagcaacggttctgtgtggactatgccaagcgt
ggcacagccggctgcaaaaaatgcaaggaaaagattgtaaagggtgtatgtcgcattggc
aaagtggtgcccaatcccttctcagagtcggggggtgatatgaaagagtggtaccacatc
aaatgcatgtttgagaaactggagcgggcccgagccaccacaaaaaaaatcgaggacctc
acagagctggaaggttgggaagagctggaagatcctgagaaagaacagataagccagcac
attgcagatctgtcttccaaggcagcaagcacaccaaagaagaaagctgttgtccaggct
aagttgacagccactggccaggtgacatctccagtgaaaggtgcttcatttgtcaccaat
accaatccccggaaattttctggcttttcagccaagcccaacaactctggggaagcccgc
tcaagccctacccctaaggcaagtctgtcctcaagcaaatgtgaccccaagcacaaggat
tgtctgctacgcgagtttcggaagttatgtgccatggtggctgaaaatcctagctacaac
acgaagacccagatcatccaggacttccttcagaaaggctcaggaggagatggtttccac
ggtgatgtgtacctaacagtgaagctgctgctgccgggtgttattaagagtgtttacaac
ttgaatgataagcagattgtgaagcttttcagccgcatttttaactgcaactcagatgat
atggcgagagatctagagcagggtgacgtgtcagagacagtcagagtcttctttgagcag
agcaagtcttttcccccagccgccaagagcctccttaccatccaggaggtggacgagttc
ctcctgcggctctccaagctcaccaaggaggacgagcagcaacaggccctgcaggacatc
gcctccaggtgtacagccaatgaccttaagtgcatcatcaggctgatcaaacatgatctg
aagatgaactcaggtgcaaaacacgtgttagatgccctagaccccaatgcctatgaagcc
ttcaaagcctcgcgcaacctgcaggatgtggtggagcgggtcctccgcaacgagcaggag
gtggagaaggagccaggccagagacgagccctgagtgtccaggcctcactgatgaccccg
gtgcagcccatgctggccgaggcctgcaagtccatcgagtacgcgatgaagaagtgtccg
aatggcatgttctctgagatcaagtacgacggagagcgagtccaggtgcataagaagggg
gaccacttcagctacttcagccgcagtctcaagcccgtcctgccgcacaaggtggcccac
tttaaggacttcatcccccaggctttccctgggggccacagcatgatcttagactctgag
gtgcttctgatcgacaacaagacaggcaaaccactgccctttgggactctgggagtgcac
aagaaagctgccttccaggatgccaacgtctgcctgtttgtttttgattgtatctacttc
aacgatgtcagcttgatggataggcctctgtgtgggcggcgcaagtttcttcacgataac
atggttgaaattcccaaccggatcatgttctcggaaatgaagcaagtctcgaaagcttcc
gacttggtggacatgatcaaccgggtgatccgagaggggctggaagggctggtgctcaag
gacgtgaagggcacctatgagcctggaaagcgtcattggctgaaagtgaagaaagactat
ttgaacgagggggccatggctgacacagctgacctcgtggtccttggggccttctatggg
caagggagcaaaggtggcatgatgtccatcttcctcatgggctgctatgacccgagcagc
cagaagtggtgcacagtcaccaagtgcgcaggcggccacgacgacgcgacgctcgcccgc
ctgcagacggagctggacatggtgaagatcagcaaggatcccagcaagatccccggctgg
ctgaaaatcaataagatctactaccctgacttcatcgtcccagacccaaagaaagctgcc
gtgtgggagatcacaggggccgaattctccagatccgaggctcacacagccgacgggatc
tccatccgattccctcgctgcacccggatccgtgatgataaggactggaagtccgccact
aatctcccccaactcaaggaactgtaccagctgtccaaggagcgcgcggccttcgcccta
gtggccggagatgaggggagctccaccactgggggcagcagtggagagaacgagggcccc
tcggggccagcagtgtcccacaaggtcccgagggcctcgcccaatggcaagaaggcagga
gggaagctgagtagctccaacagcaaaggcggcggcaagctggctgcaaagccttcccct
gtgaaagtgggggagaagcggaaggctccagacgagaccccctgccaggcaaaggtgctg
ctggacatcttcaccggggtgcggctctacctgccgccctccacgccagacttcagccgg
ctcagacgctactttgtggcattcgatggggacctggtgcaggaatttgacgtggcctcg
gccacacatgtgctgggtagcagggaccagaaccctgcagcccagcaggtgtccccggag
tggatttgggcatgtatccggaaacggaggctgctggctccctgctag

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