Sus scrofa (pig): 397086
Help
Entry
397086 CDS
T01009
Symbol
TNF
Name
(RefSeq) tumor necrosis factor
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc01523
Antifolate resistance
ssc04010
MAPK signaling pathway
ssc04060
Cytokine-cytokine receptor interaction
ssc04061
Viral protein interaction with cytokine and cytokine receptor
ssc04064
NF-kappa B signaling pathway
ssc04071
Sphingolipid signaling pathway
ssc04150
mTOR signaling pathway
ssc04210
Apoptosis
ssc04217
Necroptosis
ssc04350
TGF-beta signaling pathway
ssc04380
Osteoclast differentiation
ssc04612
Antigen processing and presentation
ssc04620
Toll-like receptor signaling pathway
ssc04621
NOD-like receptor signaling pathway
ssc04622
RIG-I-like receptor signaling pathway
ssc04625
C-type lectin receptor signaling pathway
ssc04640
Hematopoietic cell lineage
ssc04650
Natural killer cell mediated cytotoxicity
ssc04657
IL-17 signaling pathway
ssc04660
T cell receptor signaling pathway
ssc04664
Fc epsilon RI signaling pathway
ssc04668
TNF signaling pathway
ssc04920
Adipocytokine signaling pathway
ssc04930
Type II diabetes mellitus
ssc04931
Insulin resistance
ssc04932
Non-alcoholic fatty liver disease
ssc04933
AGE-RAGE signaling pathway in diabetic complications
ssc04936
Alcoholic liver disease
ssc04940
Type I diabetes mellitus
ssc05010
Alzheimer disease
ssc05014
Amyotrophic lateral sclerosis
ssc05020
Prion disease
ssc05022
Pathways of neurodegeneration - multiple diseases
ssc05132
Salmonella infection
ssc05133
Pertussis
ssc05134
Legionellosis
ssc05135
Yersinia infection
ssc05140
Leishmaniasis
ssc05142
Chagas disease
ssc05143
African trypanosomiasis
ssc05144
Malaria
ssc05145
Toxoplasmosis
ssc05146
Amoebiasis
ssc05152
Tuberculosis
ssc05160
Hepatitis C
ssc05161
Hepatitis B
ssc05163
Human cytomegalovirus infection
ssc05164
Influenza A
ssc05165
Human papillomavirus infection
ssc05166
Human T-cell leukemia virus 1 infection
ssc05168
Herpes simplex virus 1 infection
ssc05169
Epstein-Barr virus infection
ssc05170
Human immunodeficiency virus 1 infection
ssc05171
Coronavirus disease - COVID-19
ssc05205
Proteoglycans in cancer
ssc05310
Asthma
ssc05321
Inflammatory bowel disease
ssc05322
Systemic lupus erythematosus
ssc05323
Rheumatoid arthritis
ssc05330
Allograft rejection
ssc05332
Graft-versus-host disease
ssc05410
Hypertrophic cardiomyopathy
ssc05414
Dilated cardiomyopathy
ssc05417
Lipid and atherosclerosis
ssc05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
397086 (TNF)
04350 TGF-beta signaling pathway
397086 (TNF)
04064 NF-kappa B signaling pathway
397086 (TNF)
04668 TNF signaling pathway
397086 (TNF)
04071 Sphingolipid signaling pathway
397086 (TNF)
04150 mTOR signaling pathway
397086 (TNF)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
397086 (TNF)
04061 Viral protein interaction with cytokine and cytokine receptor
397086 (TNF)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
397086 (TNF)
04217 Necroptosis
397086 (TNF)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
397086 (TNF)
04620 Toll-like receptor signaling pathway
397086 (TNF)
04621 NOD-like receptor signaling pathway
397086 (TNF)
04622 RIG-I-like receptor signaling pathway
397086 (TNF)
04625 C-type lectin receptor signaling pathway
397086 (TNF)
04650 Natural killer cell mediated cytotoxicity
397086 (TNF)
04612 Antigen processing and presentation
397086 (TNF)
04660 T cell receptor signaling pathway
397086 (TNF)
04657 IL-17 signaling pathway
397086 (TNF)
04664 Fc epsilon RI signaling pathway
397086 (TNF)
09152 Endocrine system
04920 Adipocytokine signaling pathway
397086 (TNF)
09158 Development and regeneration
04380 Osteoclast differentiation
397086 (TNF)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
397086 (TNF)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
397086 (TNF)
05170 Human immunodeficiency virus 1 infection
397086 (TNF)
05161 Hepatitis B
397086 (TNF)
05160 Hepatitis C
397086 (TNF)
05171 Coronavirus disease - COVID-19
397086 (TNF)
05164 Influenza A
397086 (TNF)
05168 Herpes simplex virus 1 infection
397086 (TNF)
05163 Human cytomegalovirus infection
397086 (TNF)
05169 Epstein-Barr virus infection
397086 (TNF)
05165 Human papillomavirus infection
397086 (TNF)
09171 Infectious disease: bacterial
05132 Salmonella infection
397086 (TNF)
05135 Yersinia infection
397086 (TNF)
05133 Pertussis
397086 (TNF)
05134 Legionellosis
397086 (TNF)
05152 Tuberculosis
397086 (TNF)
09174 Infectious disease: parasitic
05146 Amoebiasis
397086 (TNF)
05144 Malaria
397086 (TNF)
05145 Toxoplasmosis
397086 (TNF)
05140 Leishmaniasis
397086 (TNF)
05142 Chagas disease
397086 (TNF)
05143 African trypanosomiasis
397086 (TNF)
09163 Immune disease
05310 Asthma
397086 (TNF)
05322 Systemic lupus erythematosus
397086 (TNF)
05323 Rheumatoid arthritis
397086 (TNF)
05321 Inflammatory bowel disease
397086 (TNF)
05330 Allograft rejection
397086 (TNF)
05332 Graft-versus-host disease
397086 (TNF)
09164 Neurodegenerative disease
05010 Alzheimer disease
397086 (TNF)
05014 Amyotrophic lateral sclerosis
397086 (TNF)
05020 Prion disease
397086 (TNF)
05022 Pathways of neurodegeneration - multiple diseases
397086 (TNF)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
397086 (TNF)
05418 Fluid shear stress and atherosclerosis
397086 (TNF)
05410 Hypertrophic cardiomyopathy
397086 (TNF)
05414 Dilated cardiomyopathy
397086 (TNF)
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
397086 (TNF)
04940 Type I diabetes mellitus
397086 (TNF)
04936 Alcoholic liver disease
397086 (TNF)
04932 Non-alcoholic fatty liver disease
397086 (TNF)
04931 Insulin resistance
397086 (TNF)
04933 AGE-RAGE signaling pathway in diabetic complications
397086 (TNF)
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
397086 (TNF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ssc04052
]
397086 (TNF)
00536 Glycosaminoglycan binding proteins [BR:
ssc00536
]
397086 (TNF)
Cytokines and neuropeptides [BR:
ssc04052
]
Cytokines
Tumor necrosis fators
397086 (TNF)
Glycosaminoglycan binding proteins [BR:
ssc00536
]
Heparan sulfate / Heparin
Cytokines
397086 (TNF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
397086
NCBI-ProteinID:
NP_999187
Ensembl:
ENSSSCG00000001404
Vega:
OTTSUSG00000001322
UniProt:
P23563
B3GDZ6
LinkDB
All DBs
Position
7:23699635..23702393
Genome browser
AA seq
232 aa
AA seq
DB search
MSTESMIRDVELAEEALAKKAGGPQGSRRCLCLSLFSFLLVAGATTLFCLLHFEVIGPQK
EEFPAGPLSINPLAQGLRSSSQTSDKPVAHVVANVKAEGQLQWQSGYANALLANGVKLKD
NQLVVPTDGLYLIYSQVLFRGQGCPSTNVFLTHTISRIAVSYQTKVNLLSAIKSPCQRET
PEGAEAKPWYEPIYLGGVFQLEKDDRLSAEINLPDYLDFAESGQVYFGIIAL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgagagcatgatccgagacgtggagctggcggaggaggcgctcgccaagaag
gccgggggcccccagggctccaggaggtgcctgtgcctcagcctcttctccttcctcctg
gtcgcaggagccaccacgctcttctgcctactgcacttcgaggttatcggcccccagaag
gaagagtttccagctggccccttgagcatcaaccctctggcccaaggactcagatcatcg
tctcaaacctcagataagcccgtcgcccacgttgtagccaatgtcaaagccgagggacag
ctccaatggcagagtgggtatgccaatgccctcctggccaacggcgtgaagctgaaagac
aaccagctggtggtgccgacagatgggctgtacctcatctactcccaggtcctcttcagg
ggccaaggctgcccttccaccaacgttttcctcactcacaccatcagccgcatcgccgtc
tcctaccagaccaaggtcaacctcctctctgccatcaagagcccttgccagagggagacc
cccgagggggccgaggccaagccctggtacgaacccatctacctgggaggggtcttccag
ctggagaaggatgatcgactcagtgccgagatcaacctgcccgactatctggactttgct
gaatctgggcaggtctattttgggatcattgccctgtga
DBGET
integrated database retrieval system