KEGG   Sus scrofa (pig): 397623
Entry
397623            CDS       T01009                                 
Symbol
SIGLEC1
Name
(RefSeq) sialoadhesin precursor
  KO
K06548  sialoadhesin
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    397623 (SIGLEC1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:ssc04090]
    397623 (SIGLEC1)
   04091 Lectins [BR:ssc04091]
    397623 (SIGLEC1)
CD molecules [BR:ssc04090]
 Proteins
  397623 (SIGLEC1)
Lectins [BR:ssc04091]
 I-type lectins (Siglecs)
  397623 (SIGLEC1)
SSDB
Motif
Pfam: Ig_2 Ig_3 I-set ig V-set Ig_4 Ig_5 C2-set_2 C1-set C2-set PepSY_TM MoCoBD_2 Thi4
Other DBs
NCBI-GeneID: 397623
NCBI-ProteinID: NP_999511
UniProt: A7LCJ3 J9S2W1
LinkDB
Position
17:31994505..32021239
AA seq 1730 aa
MDFLLLLLLLASSALAGLASWTVSSPETVQGIKGSCLIIPCTFGFPANVEVPHGITAIWY
YDYSGKRLVVSHSRNPKVVENHFQGRALLLGQVEQRTCSLLLKDLQPQDSGSYNFRFEIS
EGNRWSDVKGTVVTVTEVPSVPTIALPAKLHEGMEVDFNCSTPYVCPTEPVNLQWQGQDP
TRSVTSHLQKLEPSGTSHMETLHMALSWQDHGRILSCQVSAAERRMQKEIHLQVQYAPKG
VEILFSHSGRNVLPGDLVTLSCQVNSSNPQVSSVQWVKDGTKLKDQKRVLQLRRAAWADA
GVYTCQAGNAVGSSVSPPVSLHVFMAEVQVSPVGSILENQTVTLACNTPKEAPSELRYSW
YKNHALLEGSHSRTLRLHSVTRADSGFYFCEVQNARGRERSPPVSVVVSHPPLTPDLTAF
LETQAGLVGILQCSVVSEPPATLVLSHGGLILASTSGEGDHSPRFSVASAPNSLRLEIQD
LGPTDSGEYMCSASSSLGNASSTLDFHANAARLLISPAAEVVEGQAVTLSCRSSLSLMPD
TRFSWYLNGALILEGPSSSLLLPAASSTDAGSYHCRAQNSHSTSGPSSPAVLTVLYAPRQ
PVFTAQLDPDTAGAGAGRQGLLLCRVDSDPPAQLQLLHRGRVVASSLSWGGGCCTCGGCF
HRMKVTKAPNLLRVEIRDPVLEDEGVYLCEASSALGNASASATLDAQATVLVITPSHTLQ
EGIEANLTCNVSREASGPANFSWFRDGALWAQGPLDTVTLLPVARTDAALYACRIVTEAG
AGLSTPVALNVLYPPDPPKLSALLDVDQGHTAVFVCTVDSRPLAQLALFRGEHLLAASSA
LRLPPRGRLQAKASANSLQLEVRDLSLGDSGSYHCEATNILGSANTSLTFQVRGAWVRVS
PSPELQEGQAVVLSCQVPIGVLEGTSYRWYRDGQPLQESTSATLRFAAITLSQAGAYHCQ
AQAPGSATTDLAAPVSLHVTYAPRQATLTTLMDSGLGRLGLLLCRVNSDPPAQLRLLHGS
RLVASTLQGVEELAGSSPRLQVATAPNTLRLEIHNAVLEDEGVYTCEATNTLGQTLASAA
FDAQAMRVQVWPNATVQEGQLVNLTCLVWTTHLAQLTYTWYRDQQQLPGAAHSILLPNVT
VTDAASYRCGILIPGQALRLSRPVALDVLYAPRRLRLTHLLESRGGQLAVVLCTVDSRPA
AQLTLSHAGRLLASSTAASVPNTLRLELWEPRPSDEGLYSCSARSPLGQANTSLELRLEG
VQVALAPSATVPEGAPVTVTCEDPAARPPTLYVWYHNSRWLQEGSAASLSFPAATRAHAG
AYTCQVQDAQGTRISQPAALHILYAPRDAVLSSFWDSRASPMAVVQCTVDSEPPAEMTLS
HDGKVLATSHGVHGLAVGTGHVQVARNALQLRVQNVPSRDKDTYVCMDRNSLGSVSTMGQ
LQPEGVHVVAEPGLDVPEGTALNLSCRLPSGPGHIGNSTFAWFRNGRQLHTESVPTLTFT
HVARAQAGLYHCQAELPAGAATSAPVLLRVLYPPKTPTMTVFVEPEGGIQGILDCRVDSE
PLASLTLHLGSRLVASSQPQAAPAKPHIRVSASPNALRVDMEELKPSDQGEYVCSASNAL
GSASAATYFGTRALHRLHLFQHLLWFLGLLASLLFLLLGLGVWYAWRRGNFYKLRMGEYS
VEMVSRKETTQMSTDQEEVTGIGDDAGSVNQAAFDPAHLCENTQSVKSTV
NT seq 5193 nt   +upstreamnt  +downstreamnt
atggacttcctgctcctgctcctcctcctggcttcatctgctctagcaggcctggcctcg
tggacggtttccagccccgagaccgtgcagggcatcaagggctcctgcctcatcatcccc
tgcaccttcggcttcccggccaacgtggaggtgccccatggcatcacagccatctggtac
tatgactactcaggcaagcgcctggtagtgagccactccaggaacccaaaggtggtggag
aaccacttccaaggccgggccctgctgttggggcaggttgaacagaggacgtgcagcctg
ctgctgaaggacctgcagccccaggactcgggctcctataacttccgctttgagatcagc
gagggcaaccgctggtcagatgtcaaaggcacagttgtcaccgtgacagaggtgcccagc
gtgcccaccattgccttgccagccaagctgcatgagggcatggaggtggacttcaactgc
tccactccctatgtgtgcccgacggagccggtcaacctacagtggcaaggccaggatccc
acccgctccgtcacctcccacctccagaagcttgagccctcgggcaccagccacatggag
accctgcacatggccctgtcctggcaggaccatggccggatcctgagctgccaggtctca
gcagccgaacgcaggatgcagaaggagattcacctccaagtgcagtatgcccccaagggt
gtggagatccttttcagccactccggacggaacgtccttccaggtgatctggtcaccctc
agctgccaggtgaatagcagcaaccctcaggtcagttccgtgcagtgggtcaaggatggg
acgaagctcaaagaccagaaacgtgtactgcagttgcgccgggcagcctgggctgatgct
ggcgtctacacctgccaagccgggaatgccgtgggctcttcagtctcacccccggtcagc
ctccacgtcttcatggctgaggtccaggtaagccctgtgggctccatcctggagaaccag
acggtgacgctggcctgcaatacacctaaggaagcgcccagcgagctgcgctacagctgg
tacaagaaccacgccctgctggagggctctcacagccgcaccctccggctgcactcagtt
accagggcggattcgggcttctacttctgcgaggtgcagaacgcccggggcagagagcgc
tctccccctgtcagcgtggtggtcagccacccacccctcaccccggacctaactgccttc
ctggagacacaggcggggctggtgggcatcctccaatgctctgtggtcagcgagccccca
gctactctggtgttgtcacacgggggcctcatcttggcctctacctccggggagggtgac
cacagcccacgcttcagtgtcgcctctgcccccaactccctgcgcctggagattcaagac
ctggggccaacagacagtggggaatacatgtgctcagccagcagttctcttgggaatgcg
tcctccaccctggacttccatgccaatgcagcccgcctcctcatcagcccagcagcagag
gtggtggaagggcaggcggtgacactgagctgcaggagcagcctgagcctgatgcctgac
acccgtttttcctggtacctgaacggggccctgattctcgaggggcccagcagcagcctc
ctgctcccagcagcctccagcacagatgccggctcataccactgccgggcccagaacagc
cacagcaccagcgggccctcctcacctgctgttctcaccgtgctctacgccccacgccag
cccgtgttcactgcccagctggaccctgatactgcaggagctggggccggacgccaaggc
ctcctcttgtgccgtgtggacagcgaccccccagcccagctgcagctgctccacaggggc
cgtgttgtggcctcttctctgtcatgggggggcggctgctgcacctgcggaggctgtttc
caccgcatgaaggtcaccaaagcacccaacctactgcgtgtagagatccgagacccggtg
ctggaggatgagggtgtgtacctgtgcgaggccagcagcgccctgggcaacgcctccgcc
tctgcaaccttggatgcccaggccactgtcctggtcatcacaccgtcacacacgctgcag
gaaggcattgaagccaacctgacttgcaacgtgagccgtgaagccagcggccctgccaac
ttctcctggttccgagatggggcgctatgggcccagggccctctggacaccgtgacgctg
ctacctgtggccagaactgatgctgccctctatgcttgccgcatcgtcaccgaggctggt
gctggcctctccacccctgtggccctgaatgtgctctatccccccgatcctccaaagttg
tcagccctcctggacgtggaccagggccacacggctgtgttcgtctgtactgtggacagt
cgccctcttgcccagttggccctgttccgtggggaacacctcctggccgccagctcggca
ctccggctcccccctcgtggccgcctccaggccaaagcctcggccaactccttgcagcta
gaggtccgagacttgagccttggggactctggcagctaccactgtgaggccaccaacatc
cttggatcagccaacacttctcttaccttccaggtccgaggagcctgggtccgggtgtca
ccgtcgcctgagctccaggagggccaggctgtggtcctgagctgccaggtacccataggg
gtcctggaggggacctcatatcgttggtatcgggatggccagcccctccaggagtccact
tcggccacgctccgttttgcagccataactctgagccaggctggagcctaccattgccaa
gcccaagctccaggctcagccaccacggacctggctgcccctgtcagcctccacgtgacc
tacgcacctcgccaggccacactcaccaccctgatggactcaggcctcgggcgactgggc
ctccttctgtgccgtgtgaacagtgaccctcctgcccagctccgactgctccatgggagc
cgcctcgtggcctctactctacaaggtgtggaggagcttgcaggcagctctccccgccta
caggtggccacagcccccaacacgctgcgcctggagatccacaacgcagtgctggaggat
gaaggcgtctacacctgcgaggccaccaacaccctgggtcagaccttggcctccgccgcc
ttcgatgcccaggctatgagagtgcaggtgtggcccaatgccaccgtgcaagaggggcag
ctggtgaacctgacctgccttgtatggaccacgcacctggcccagctcacctacacgtgg
taccgagaccagcagcagctcccaggtgctgcccactccatcctcctgcccaatgtcact
gtcacagatgccgcctcctaccgctgtggcatattgatccctggccaggcactccgcctc
tccagacctgtcgccctggatgtcctctacgcaccccgcagactgcgcctgacccatctc
ttggagagccgtggtgggcagctggccgtggtgctgtgcactgtggacagtcgcccagct
gcccagctgaccctcagccatgctggccgcctcctggcctcctcaaccgcagcctctgtc
cccaacaccctgcgcctggagctgtgggagccccggcccagtgatgagggtctctacagc
tgctcggcccgcagtcctctgggccaggccaacacatccctggagctgcggctagagggc
gtgcaggtggcactggctccatcggccactgtgccggagggggcccctgtcacagtgacc
tgtgaagaccctgctgcccgcccacccactctctatgtctggtaccacaacagccgttgg
ctgcaggaggggtcggctgcctccctctcgtttccagcggctacacgggctcacgcgggc
gcctatacctgccaggtccaggatgcccagggcacacgcatctcccagcccgcagcactg
cacatcctctatgcccctcgggatgctgtcctttcctccttctgggactcaagggccagc
cctatggccgtggtacagtgcactgtggacagcgagccacctgccgagatgaccctgtcc
catgatggcaaggtgctggccaccagccatggggtccacggcttagcagtggggacaggc
catgtccaggtggcccgcaacgccctgcagctgcgggtgcagaatgtgccctcacgtgac
aaggacacctacgtctgcatggaccgcaactccttgggctcagtcagcaccatggggcag
ctgcagccagaaggtgtgcacgtggtagctgagccagggctggatgtgcctgaaggcaca
gcgctgaacctgagctgtcgcctccctagtggccctgggcacataggcaactccaccttt
gcttggttccggaacggtcggcagctacacacagagtctgtgcccacccttaccttcacc
catgtggcccgcgcccaagctggcttgtaccactgccaggctgagctccccgccggggct
gccacctctgctccagtcttgctccgggtgctctaccctcccaagacgcccaccatgact
gtttttgtggagcccgagggtggcatccagggcattctggactgccgagtggacagtgag
cccctagccagcctgaccctccacctgggcagtcggctggtggcctccagccagcctcag
gctgcccctgccaagccgcacatccgcgtctcagccagtcccaatgccttgcgagtggac
atggaggagctgaagcccagtgaccagggggagtatgtgtgctcggcctccaatgccctg
ggctctgcctctgctgccacctacttcggaaccagagccctgcatcgcctgcatctgttc
cagcaccttctctggttcctggggctgctggcgagcctcctcttcctactgttgggcctg
ggggtctggtacgcctggagacggggaaatttttacaagctgagaatgggcgaatattca
gtagagatggtatctcggaaggaaaccacgcagatgtccactgaccaggaagaagttact
ggaatcggtgatgatgcgggctctgtgaaccaggcggcatttgatcctgcccacctctgt
gaaaacacacagtctgtgaaaagcacagtctga

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