Sus scrofa (pig): 397623
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Entry
397623 CDS
T01009
Symbol
SIGLEC1
Name
(RefSeq) sialoadhesin precursor
KO
K06548
sialoadhesin
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
397623 (SIGLEC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ssc04090
]
397623 (SIGLEC1)
04091 Lectins [BR:
ssc04091
]
397623 (SIGLEC1)
CD molecules [BR:
ssc04090
]
Proteins
397623 (SIGLEC1)
Lectins [BR:
ssc04091
]
I-type lectins (Siglecs)
397623 (SIGLEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
V-set
Ig_4
Ig_5
C2-set_2
C1-set
C2-set
PepSY_TM
MoCoBD_2
Thi4
Motif
Other DBs
NCBI-GeneID:
397623
NCBI-ProteinID:
NP_999511
UniProt:
A7LCJ3
J9S2W1
LinkDB
All DBs
Position
17:31994505..32021239
Genome browser
AA seq
1730 aa
AA seq
DB search
MDFLLLLLLLASSALAGLASWTVSSPETVQGIKGSCLIIPCTFGFPANVEVPHGITAIWY
YDYSGKRLVVSHSRNPKVVENHFQGRALLLGQVEQRTCSLLLKDLQPQDSGSYNFRFEIS
EGNRWSDVKGTVVTVTEVPSVPTIALPAKLHEGMEVDFNCSTPYVCPTEPVNLQWQGQDP
TRSVTSHLQKLEPSGTSHMETLHMALSWQDHGRILSCQVSAAERRMQKEIHLQVQYAPKG
VEILFSHSGRNVLPGDLVTLSCQVNSSNPQVSSVQWVKDGTKLKDQKRVLQLRRAAWADA
GVYTCQAGNAVGSSVSPPVSLHVFMAEVQVSPVGSILENQTVTLACNTPKEAPSELRYSW
YKNHALLEGSHSRTLRLHSVTRADSGFYFCEVQNARGRERSPPVSVVVSHPPLTPDLTAF
LETQAGLVGILQCSVVSEPPATLVLSHGGLILASTSGEGDHSPRFSVASAPNSLRLEIQD
LGPTDSGEYMCSASSSLGNASSTLDFHANAARLLISPAAEVVEGQAVTLSCRSSLSLMPD
TRFSWYLNGALILEGPSSSLLLPAASSTDAGSYHCRAQNSHSTSGPSSPAVLTVLYAPRQ
PVFTAQLDPDTAGAGAGRQGLLLCRVDSDPPAQLQLLHRGRVVASSLSWGGGCCTCGGCF
HRMKVTKAPNLLRVEIRDPVLEDEGVYLCEASSALGNASASATLDAQATVLVITPSHTLQ
EGIEANLTCNVSREASGPANFSWFRDGALWAQGPLDTVTLLPVARTDAALYACRIVTEAG
AGLSTPVALNVLYPPDPPKLSALLDVDQGHTAVFVCTVDSRPLAQLALFRGEHLLAASSA
LRLPPRGRLQAKASANSLQLEVRDLSLGDSGSYHCEATNILGSANTSLTFQVRGAWVRVS
PSPELQEGQAVVLSCQVPIGVLEGTSYRWYRDGQPLQESTSATLRFAAITLSQAGAYHCQ
AQAPGSATTDLAAPVSLHVTYAPRQATLTTLMDSGLGRLGLLLCRVNSDPPAQLRLLHGS
RLVASTLQGVEELAGSSPRLQVATAPNTLRLEIHNAVLEDEGVYTCEATNTLGQTLASAA
FDAQAMRVQVWPNATVQEGQLVNLTCLVWTTHLAQLTYTWYRDQQQLPGAAHSILLPNVT
VTDAASYRCGILIPGQALRLSRPVALDVLYAPRRLRLTHLLESRGGQLAVVLCTVDSRPA
AQLTLSHAGRLLASSTAASVPNTLRLELWEPRPSDEGLYSCSARSPLGQANTSLELRLEG
VQVALAPSATVPEGAPVTVTCEDPAARPPTLYVWYHNSRWLQEGSAASLSFPAATRAHAG
AYTCQVQDAQGTRISQPAALHILYAPRDAVLSSFWDSRASPMAVVQCTVDSEPPAEMTLS
HDGKVLATSHGVHGLAVGTGHVQVARNALQLRVQNVPSRDKDTYVCMDRNSLGSVSTMGQ
LQPEGVHVVAEPGLDVPEGTALNLSCRLPSGPGHIGNSTFAWFRNGRQLHTESVPTLTFT
HVARAQAGLYHCQAELPAGAATSAPVLLRVLYPPKTPTMTVFVEPEGGIQGILDCRVDSE
PLASLTLHLGSRLVASSQPQAAPAKPHIRVSASPNALRVDMEELKPSDQGEYVCSASNAL
GSASAATYFGTRALHRLHLFQHLLWFLGLLASLLFLLLGLGVWYAWRRGNFYKLRMGEYS
VEMVSRKETTQMSTDQEEVTGIGDDAGSVNQAAFDPAHLCENTQSVKSTV
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atggacttcctgctcctgctcctcctcctggcttcatctgctctagcaggcctggcctcg
tggacggtttccagccccgagaccgtgcagggcatcaagggctcctgcctcatcatcccc
tgcaccttcggcttcccggccaacgtggaggtgccccatggcatcacagccatctggtac
tatgactactcaggcaagcgcctggtagtgagccactccaggaacccaaaggtggtggag
aaccacttccaaggccgggccctgctgttggggcaggttgaacagaggacgtgcagcctg
ctgctgaaggacctgcagccccaggactcgggctcctataacttccgctttgagatcagc
gagggcaaccgctggtcagatgtcaaaggcacagttgtcaccgtgacagaggtgcccagc
gtgcccaccattgccttgccagccaagctgcatgagggcatggaggtggacttcaactgc
tccactccctatgtgtgcccgacggagccggtcaacctacagtggcaaggccaggatccc
acccgctccgtcacctcccacctccagaagcttgagccctcgggcaccagccacatggag
accctgcacatggccctgtcctggcaggaccatggccggatcctgagctgccaggtctca
gcagccgaacgcaggatgcagaaggagattcacctccaagtgcagtatgcccccaagggt
gtggagatccttttcagccactccggacggaacgtccttccaggtgatctggtcaccctc
agctgccaggtgaatagcagcaaccctcaggtcagttccgtgcagtgggtcaaggatggg
acgaagctcaaagaccagaaacgtgtactgcagttgcgccgggcagcctgggctgatgct
ggcgtctacacctgccaagccgggaatgccgtgggctcttcagtctcacccccggtcagc
ctccacgtcttcatggctgaggtccaggtaagccctgtgggctccatcctggagaaccag
acggtgacgctggcctgcaatacacctaaggaagcgcccagcgagctgcgctacagctgg
tacaagaaccacgccctgctggagggctctcacagccgcaccctccggctgcactcagtt
accagggcggattcgggcttctacttctgcgaggtgcagaacgcccggggcagagagcgc
tctccccctgtcagcgtggtggtcagccacccacccctcaccccggacctaactgccttc
ctggagacacaggcggggctggtgggcatcctccaatgctctgtggtcagcgagccccca
gctactctggtgttgtcacacgggggcctcatcttggcctctacctccggggagggtgac
cacagcccacgcttcagtgtcgcctctgcccccaactccctgcgcctggagattcaagac
ctggggccaacagacagtggggaatacatgtgctcagccagcagttctcttgggaatgcg
tcctccaccctggacttccatgccaatgcagcccgcctcctcatcagcccagcagcagag
gtggtggaagggcaggcggtgacactgagctgcaggagcagcctgagcctgatgcctgac
acccgtttttcctggtacctgaacggggccctgattctcgaggggcccagcagcagcctc
ctgctcccagcagcctccagcacagatgccggctcataccactgccgggcccagaacagc
cacagcaccagcgggccctcctcacctgctgttctcaccgtgctctacgccccacgccag
cccgtgttcactgcccagctggaccctgatactgcaggagctggggccggacgccaaggc
ctcctcttgtgccgtgtggacagcgaccccccagcccagctgcagctgctccacaggggc
cgtgttgtggcctcttctctgtcatgggggggcggctgctgcacctgcggaggctgtttc
caccgcatgaaggtcaccaaagcacccaacctactgcgtgtagagatccgagacccggtg
ctggaggatgagggtgtgtacctgtgcgaggccagcagcgccctgggcaacgcctccgcc
tctgcaaccttggatgcccaggccactgtcctggtcatcacaccgtcacacacgctgcag
gaaggcattgaagccaacctgacttgcaacgtgagccgtgaagccagcggccctgccaac
ttctcctggttccgagatggggcgctatgggcccagggccctctggacaccgtgacgctg
ctacctgtggccagaactgatgctgccctctatgcttgccgcatcgtcaccgaggctggt
gctggcctctccacccctgtggccctgaatgtgctctatccccccgatcctccaaagttg
tcagccctcctggacgtggaccagggccacacggctgtgttcgtctgtactgtggacagt
cgccctcttgcccagttggccctgttccgtggggaacacctcctggccgccagctcggca
ctccggctcccccctcgtggccgcctccaggccaaagcctcggccaactccttgcagcta
gaggtccgagacttgagccttggggactctggcagctaccactgtgaggccaccaacatc
cttggatcagccaacacttctcttaccttccaggtccgaggagcctgggtccgggtgtca
ccgtcgcctgagctccaggagggccaggctgtggtcctgagctgccaggtacccataggg
gtcctggaggggacctcatatcgttggtatcgggatggccagcccctccaggagtccact
tcggccacgctccgttttgcagccataactctgagccaggctggagcctaccattgccaa
gcccaagctccaggctcagccaccacggacctggctgcccctgtcagcctccacgtgacc
tacgcacctcgccaggccacactcaccaccctgatggactcaggcctcgggcgactgggc
ctccttctgtgccgtgtgaacagtgaccctcctgcccagctccgactgctccatgggagc
cgcctcgtggcctctactctacaaggtgtggaggagcttgcaggcagctctccccgccta
caggtggccacagcccccaacacgctgcgcctggagatccacaacgcagtgctggaggat
gaaggcgtctacacctgcgaggccaccaacaccctgggtcagaccttggcctccgccgcc
ttcgatgcccaggctatgagagtgcaggtgtggcccaatgccaccgtgcaagaggggcag
ctggtgaacctgacctgccttgtatggaccacgcacctggcccagctcacctacacgtgg
taccgagaccagcagcagctcccaggtgctgcccactccatcctcctgcccaatgtcact
gtcacagatgccgcctcctaccgctgtggcatattgatccctggccaggcactccgcctc
tccagacctgtcgccctggatgtcctctacgcaccccgcagactgcgcctgacccatctc
ttggagagccgtggtgggcagctggccgtggtgctgtgcactgtggacagtcgcccagct
gcccagctgaccctcagccatgctggccgcctcctggcctcctcaaccgcagcctctgtc
cccaacaccctgcgcctggagctgtgggagccccggcccagtgatgagggtctctacagc
tgctcggcccgcagtcctctgggccaggccaacacatccctggagctgcggctagagggc
gtgcaggtggcactggctccatcggccactgtgccggagggggcccctgtcacagtgacc
tgtgaagaccctgctgcccgcccacccactctctatgtctggtaccacaacagccgttgg
ctgcaggaggggtcggctgcctccctctcgtttccagcggctacacgggctcacgcgggc
gcctatacctgccaggtccaggatgcccagggcacacgcatctcccagcccgcagcactg
cacatcctctatgcccctcgggatgctgtcctttcctccttctgggactcaagggccagc
cctatggccgtggtacagtgcactgtggacagcgagccacctgccgagatgaccctgtcc
catgatggcaaggtgctggccaccagccatggggtccacggcttagcagtggggacaggc
catgtccaggtggcccgcaacgccctgcagctgcgggtgcagaatgtgccctcacgtgac
aaggacacctacgtctgcatggaccgcaactccttgggctcagtcagcaccatggggcag
ctgcagccagaaggtgtgcacgtggtagctgagccagggctggatgtgcctgaaggcaca
gcgctgaacctgagctgtcgcctccctagtggccctgggcacataggcaactccaccttt
gcttggttccggaacggtcggcagctacacacagagtctgtgcccacccttaccttcacc
catgtggcccgcgcccaagctggcttgtaccactgccaggctgagctccccgccggggct
gccacctctgctccagtcttgctccgggtgctctaccctcccaagacgcccaccatgact
gtttttgtggagcccgagggtggcatccagggcattctggactgccgagtggacagtgag
cccctagccagcctgaccctccacctgggcagtcggctggtggcctccagccagcctcag
gctgcccctgccaagccgcacatccgcgtctcagccagtcccaatgccttgcgagtggac
atggaggagctgaagcccagtgaccagggggagtatgtgtgctcggcctccaatgccctg
ggctctgcctctgctgccacctacttcggaaccagagccctgcatcgcctgcatctgttc
cagcaccttctctggttcctggggctgctggcgagcctcctcttcctactgttgggcctg
ggggtctggtacgcctggagacggggaaatttttacaagctgagaatgggcgaatattca
gtagagatggtatctcggaaggaaaccacgcagatgtccactgaccaggaagaagttact
ggaatcggtgatgatgcgggctctgtgaaccaggcggcatttgatcctgcccacctctgt
gaaaacacacagtctgtgaaaagcacagtctga
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integrated database retrieval system