Staphylococcus pseudintermedius HKU10-03: SPSINT_2243
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Entry
SPSINT_2243 CDS
T01396
Name
(GenBank) Thiamin biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ssd
Staphylococcus pseudintermedius HKU10-03
Pathway
ssd00730
Thiamine metabolism
ssd01100
Metabolic pathways
ssd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ssd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SPSINT_2243
Enzymes [BR:
ssd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SPSINT_2243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ADV06771
LinkDB
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Position
complement(2355986..2357722)
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AA seq
578 aa
AA seq
DB search
MKQEQIELKKNFPASQRIFKQGEDADIQVPFRQIALSETVTEQGTTENEPFVVYDTAGPY
HDDTYEVDVTKGIPALRTNWIEDRQDVEHYEGRRVQSIDNGYHSATHKNIVEHPFKYQPR
RAQEGKRVTQMYYAKQGIITKEMKFVAARENVSPEFVRDEIARGRAIIPNNINHPESEPM
IIGKNFQVKINANIGNSAVSSSIEAEIEKLVWAIHWGADTMMDLSTGKNIHATREYLIRN
SPVPVGTVPIYQALEKVNGIAEDLTWEIYRDTLIEQAEQGVDYFTIHAGVLLRYVPLTVD
RLTGIVSRGGSIMAQWCLAHHEESFLYTHFDEICQILNRYDIAVSLGDGLRPGSIYDAND
ESQIAELKTLGELTDIAWEHDVQVMIEGPGHVPMHKIKENQELADFYCKEAPFYTLGPLT
TDIAPAYDHITSAIGAAQIASHGTAMLCYVTPKEHLGLPNKEDVRDGVVTYKIAAHAADI
AKGLPGATDRDDAISKARFEFRWIDQFNLSLDPERARAFHDETLPAESAKVAHFCSMCGP
KFCSMRISHNIRDAHKEKLAGMQEMAEEFKAQGSKIYH
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagaacaaattgaattaaagaaaaactttccagcaagtcaacgtatttttaag
caaggtgaagatgcggatattcaagtcccatttcgccaaatcgctttgtctgaaacagta
actgaacaagggacaacggaaaatgaacctttcgtcgtctacgatacagcggggccttat
catgatgacacatatgaagtcgatgttacgaaaggcattccggcactgcgcacaaattgg
attgaagaccgtcaagatgtcgaacattatgaaggccgtcgtgtgcaatcaatcgacaat
ggttaccattcagcaacgcataaaaatattgttgaacatccattcaaatatcaaccgaga
cgtgcacaagaggggaaacgcgtgacacaaatgtattatgcgaaacaaggtatcatcact
aaagaaatgaagttcgttgcagcgcgtgaaaatgtcagtccagaatttgtcagagatgag
attgcgagagggcgcgcgattattccgaacaacatcaatcatcctgaatcagaacccatg
attatcggtaaaaactttcaagtgaagattaatgcaaatatcggtaactctgctgtatcg
tcctctattgaagcagaaattgaaaagttagtctgggcgattcattggggggctgatacg
atgatggacttatcgacaggaaaaaacattcatgcgacacgagagtatttaatccgtaac
tcgccagttccagttggtacggtgccgatttatcaagcgttggaaaaagtgaacggtatc
gcggaagacttaacctgggaaatatatcgagatactttaattgaacaagctgaacaaggt
gtggattactttacgattcatgcaggtgtcttattacgctatgtgccattaacagtggat
cgtttaacaggcatcgtgtctcgtggtggctcaattatggcgcaatggtgtttggcccat
cacgaagaaagctttttatacacgcattttgatgaaatttgtcaaatattgaaccgttat
gatattgcggtgtcattaggtgatggtttacgtccgggttcgatttatgatgcaaatgat
gaaagtcaaattgctgaactgaaaacgttaggtgaattgaccgatattgcttgggaacac
gatgtccaagtgatgatagaaggacctgggcatgtaccgatgcataaaattaaagaaaac
caagagttggcagacttttattgtaaagaagcgccattttatacactcggaccgctaaca
accgatattgcaccggcatatgaccacatcacatcagcgattggtgcagctcaaatcgcg
agtcatgggacagcgatgttatgttatgtgacacctaaagagcatctcggcttaccgaat
aaagaggacgtgcgtgatggcgtcgtgacgtacaaaatcgccgcacatgccgctgatatc
gctaaagggttaccgggtgcgacagatcgagatgatgcgattagtaaagcccgctttgaa
tttagatggatagatcagtttaacttatcgcttgatcctgaacgcgcacgtgcttttcat
gatgaaacattgccggcagaatcagctaaagtggcgcatttctgtagtatgtgtggaccg
aaattctgttcaatgcgtatttctcacaatatccgtgatgcgcataaagaaaaattagca
gggatgcaagaaatggctgaagaatttaaagcacaaggaagtaagatttaccattaa
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