Shewanella sediminis: Ssed_0283
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Entry
Ssed_0283 CDS
T00596
Name
(GenBank) signal transduction histidine kinase, nitrogen specific, NtrB
KO
K07708
two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:
2.7.13.3
]
Organism
sse
Shewanella sediminis
Pathway
sse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ssed_0283
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sse01001
]
Ssed_0283
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sse02022
]
Ssed_0283
Enzymes [BR:
sse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Ssed_0283
Protein kinases [BR:
sse01001
]
Histidine kinases
NtrC family
Ssed_0283
Two-component system [BR:
sse02022
]
NtrC family
GlnL-GlnG (nitrogen regulation)
Ssed_0283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
PAS_8
PAS_4
PAS
HATPase_c_3
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ABV34896
UniProt:
A8FPX3
LinkDB
All DBs
Position
complement(333272..334312)
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AA seq
346 aa
AA seq
DB search
MDIKHLFNNLVTAVMVIDVDLKLCYANAAAEQLLGVGSHRLTEHVLSDSFQILGVSTDLL
SKAIRENQGLTVNTAPLVTLDNQHHTVDITLTPLEQEQGLGLLELRQVDQQRRIHQQLTL
DAQQQAAQYLVRNLAHEIKNPLGGLRGAAQLLSRELHDPQLNEFTDLIIEQADRLRNLVD
RLLGPQRPTQHSLHNIHEVVQKVLNLVNMALPPNITLKQDYDPSIPDIQMDPEQLQQAVL
NIVQNAIQALDTAGGEILIRTRTQHQVTIGTLRHKLVLALSIIDNGPGIKPELLDTLFYP
MVTGRDNGSGLGLSIAHNFARLHGGRIDCHSKLGRTEFTILLPIKN
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggatataaaacacctgttcaataaccttgtaacagcagtcatggtcatcgatgttgat
ctcaagctttgctatgccaacgcagcggctgagcagctcttaggtgtgggaagccatcgc
ttaaccgaacatgttctatcagacagttttcaaatccttggcgtaagtaccgatttattg
agtaaggctatcagagaaaaccaagggctcacggttaataccgcccccctggtaacattg
gataaccaacatcataccgtagacataacgctcacccctttagagcaggaacagggctta
gggctgttagaactcaggcaggtagatcaacagaggcgtattcatcaacaactgacttta
gatgcgcaacaacaagccgctcaatacttggtgagaaacctggcgcatgaaatcaaaaac
cctttgggtggccttcgtggtgcagcgcaactgctctctcgtgaactacatgatccgcag
ttgaatgagtttaccgatcttattatcgagcaagccgaccgactacgaaatctggtggac
agattactcggcccccagagaccaacccaacatagcctgcataatattcatgaagtcgtt
caaaaagtacttaaccttgtgaacatggcccttccaccgaacatcacgctgaagcaagat
tacgacccttccatacccgatattcaaatggatcctgaacagctgcaacaagccgtactc
aacatagttcaaaatgcaattcaggcactcgacaccgcaggcggggagatattgataagg
acgcgcacccagcaccaagtcaccatcggcactttaagacacaaacttgtattagcctta
tccatcatagacaacggcccaggtatcaaacctgaactattagacacacttttttaccct
atggtaacaggtcgtgataacggttcaggacttggtttatcgattgcgcataactttgct
cggctacatggcggtagaattgattgccattccaagcttgggaggactgaattcacaatc
ttacttcccataaaaaactaa
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