Shewanella sediminis: Ssed_1790
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Entry
Ssed_1790 CDS
T00596
Name
(GenBank) integral membrane sensor signal transduction histidine kinase
KO
K07637
two-component system, OmpR family, sensor histidine kinase PhoQ [EC:
2.7.13.3
]
Organism
sse
Shewanella sediminis
Pathway
sse01503
Cationic antimicrobial peptide (CAMP) resistance
sse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ssed_1790
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Ssed_1790
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sse01001
]
Ssed_1790
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sse02022
]
Ssed_1790
01504 Antimicrobial resistance genes [BR:
sse01504
]
Ssed_1790
Enzymes [BR:
sse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Ssed_1790
Protein kinases [BR:
sse01001
]
Histidine kinases
OmpR family
Ssed_1790
Two-component system [BR:
sse02022
]
OmpR family
PhoQ-PhoP (magnesium transport)
Ssed_1790
Antimicrobial resistance genes [BR:
sse01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, protease PgtE [MD:
M00744
]
Ssed_1790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HATPase_c_5
HATPase_c_3
ANIS5_cation-bd
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
ABV36401
UniProt:
A8FU78
LinkDB
All DBs
Position
complement(2157640..2158995)
Genome browser
AA seq
451 aa
AA seq
DB search
MRFGLNFKPKKRLLTRMFLTSLSIIALVGFGLAWLVNLLHAQNNYNEETAQLIAEIPKVA
AELKEHDLIPETSEWLDENNTPERYVIASCDQNFKQVWTSSLAVDRGLFDTCERFDEIRN
DSPPYYLNLADNKGYFIYLLSVEIARNQYNLLVMKDAEKLEKEMDKFSRRTYFRLGLVLA
LALVLLISAGYWGMRPLVRMRNELDSVNSGKSTELSQDYPVELEGVTQALNQLLVQSSAQ
QQRYQNAMNDLAHSLKTRLAAVHAITDDATLDKQATSEKIMEQVSQMDQLVKYQLKRAML
GRKGLKQEQTQVAPLVNQLSQMLFKVYRDKQVEFTANIPIEHVFPGDKGDLMELCGNLME
NAFKLCISQVRVSASYNDAGEFELIVEDDGQGVEESIRKKIIERGVRADTQKAGQGIGLA
VCNEIVISYNGKLSIETSELEGAKFRITIPI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcggtctgaactttaaacccaagaaacgtctgcttacgcggatgtttctcacc
tctctgtctatcatagctttagtcggctttggtctggcttggttagttaatcttcttcat
gcgcaaaataattataatgaggagacggctcagctgatcgccgagatccccaaagtcgcc
gctgaactgaaagagcatgatctcatccctgaaaccagtgagtggctcgatgaaaataac
accccggaacgttacgtcatagccagctgtgatcaaaactttaaacaggtatggacctct
tcccttgccgtagatagagggctatttgatacttgtgagcgtttcgatgagatccgcaat
gactccccgccctattatctgaaccttgccgataacaaaggctatttcatctatctgctg
tcggttgagatcgccagaaatcaatacaatttattggtgatgaaagacgctgaaaaactc
gaaaaggagatggataaattcagtcgtcgaacctatttcaggctaggtttggtgttggct
ctagcgctagtgctactgatcagtgccggatactggggaatgcgtcctctggtacgcatg
agaaatgaactggacagcgttaatagcggaaaatcgacggagttatctcaggactaccct
gttgaattagaaggcgtcacccaggcactaaaccaactattggttcaatccagtgctcag
caacagcgatatcaaaatgcgatgaacgaccttgctcatagtttaaagacccgattggcc
gcagtgcatgccattaccgatgacgcaacactcgacaagcaggccaccagtgaaaaaatc
atggagcaagtgagtcagatggatcagttggttaagtatcaactgaaacgcgccatgttg
ggacgcaaaggcttgaagcaggagcaaacccaagtcgctcccttagttaaccagctctca
caaatgttgtttaaagtttaccgtgacaagcaagttgagtttaccgctaatattcctatc
gaacatgtattcccgggggataaaggtgatctgatggaactgtgtggaaacctgatggaa
aatgcatttaaactctgtatcagccaggttagggtttcagccagttacaacgatgccggt
gaatttgaactgatagtcgaagatgacggccaaggcgttgaagagagtatcaggaagaaa
atcattgaaagaggtgtcagggccgatactcaaaaggccggacaagggatcggactcgcg
gtatgtaacgaaatcgtcatcagttacaacggtaagttatctatcgaaacttctgaattg
gaaggcgcaaaattcaggatcactatccctatttaa
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