Sclerotinia sclerotiorum: SS1G_00664
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Entry
SS1G_00664 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03013
Nucleocytoplasmic transport
ssl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SS1G_00664
09122 Translation
03013 Nucleocytoplasmic transport
SS1G_00664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_00664
03041 Spliceosome [BR:
ssl03041
]
SS1G_00664
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
SS1G_00664
Spliceosome [BR:
ssl03041
]
Complex C
Other components
EJC/TREX
SS1G_00664
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
SS1G_00664
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
5494453
NCBI-ProteinID:
XP_001598575
UniProt:
A7E5T9
A0A1D9PZM6
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MEGHGLPMVDAFAQLLLEMLQQAELVKEALTIESPLTKTELANTYERIDRIFNEAASIES
KKRSQYAIIETAVRDTFNNLLASISIENSSSSRLWNLLDIISILSDDEQCEPALLFWLVE
ELLDSQTIAGCRKIFDYLESRREKITAKHFNQKNLVILRSCNELLRRLSRAEDTAFCGRV
FIFMFQSFPLGDKSSVNLRGEFHVENVTSFDALPRNPVDTENMEVDSDSNLKTTPPDTKA
TPNGRTSTARGSEDSNGSGKDVATSKHEPPMKPDELYPIFWSLQQSFSQPKRLFNAENFA
EFKKGLEATIATFKSVQHETVGRPAARAAEDNKRGTKRKRSQGDDDLANSFNPKYLTSRD
LFELEISDLSFRRHILVQILIIMDFLLSLSTKAKEKLSKALPENINRSVTYADQTLSEED
TKWSLETKKIIAEYLKKGADGAFFYRMVETVLSRDKNWVRWKVENCPSIARPAVSPQDYI
DAKASARKATTNKRLRPNPLGSLDLKFLAETDVQSGLERLKKSERYQVPSIKSFRNKIDL
DDMDIDMARDEESKNVAIEAKASKCWRALRIASASKLATFDKIEKSDSIDEVFKDDVKPD
DLITPCDEDALENGDPKVGEGNENAKVLPLGNEDADMEHEKKDEQSSIPAVPVAEVET
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccacggtctgccaatggtggacgcttttgcgcaattattattggaaatgcta
cagcaggctgaattggtcaaagaagctcttacgatagagtcgccattgaccaagaccgaa
cttgcaaatacatacgagcgaatcgatcgaatattcaacgaagcggcatctatagaatct
aaaaagcgcagtcagtatgccatcatcgaaaccgctgttcgagatactttcaacaattta
ctggcctccatatctattgaaaattcttcctcttcacgattatggaacctcctcgacatc
atctccatcctatctgacgacgagcaatgcgaacccgcccttttattttggcttgttgaa
gaattgctggacagtcagacaattgctggatgccggaagatatttgactacctcgagtca
cgacgtgaaaagatcacggcaaaacatttcaaccaaaagaatctagtaattttgagaagc
tgcaacgagcttctgcggcgactttccagggctgaggacactgcattttgtggtcgagtt
tttattttcatgtttcagagctttccacttggtgacaagagttctgtgaatttgcgcggc
gaatttcatgttgaaaatgtcacatccttcgatgccctaccgcgcaatccagtagacaca
gaaaatatggaagtggattcggatagcaacctgaaaacaactccgccagacaccaaagca
actccaaatggacgaacgagcacggcgagagggtctgaagacagcaatggttccggcaag
gatgtagcaacatcaaaacatgaaccgccgatgaaacctgatgagttatacccaatcttt
tggtcattacagcagagctttagccagccgaagagattgtttaatgccgagaattttgct
gagtttaagaaaggtctggaagctacaatagctacattcaagtctgtccagcatgaaact
gtagggcgcccggcagcgagagcggcagaggataataagagagggacgaaaagaaagcgc
agtcaaggagacgatgacctagcaaactctttcaacccgaagtatctcacaagcagggac
ttgtttgaattagagattagcgacttatcatttagaaggcatatactagtacaaatctta
ataatcatggatttccttctttcattaagcaccaaagcgaaagagaagctttcaaaagct
ttgccagagaatattaacagatcggtcacatatgccgaccagacacttagtgaggaagat
acaaaatggtcgttagagactaaaaagatcattgcagaatatttgaagaaaggtgcagat
ggcgcattcttctatcgcatggtagagacggttctttcgagagacaagaattgggttcgt
tggaaggttgaaaactgcccttctattgctaggccagccgtttcgccccaggattatatt
gatgctaaagcatcagctcgcaaagctacaactaataaacgattacgccccaatcctttg
gggtcgctggacctcaaattcctcgcggaaaccgacgtacaaagtggcttagagaggctg
aagaaatcagaaaggtatcaagttccctctatcaagagtttcagaaataaaatcgacctg
gatgatatggatatcgatatggctcgggatgaggaatcaaaaaacgtggctatagaagca
aaagcgagtaaatgttggagagcactacgaatcgctagtgctagcaaacttgctactttt
gacaaaatcgagaaatcggatagcatcgacgaagttttcaaggatgatgttaaaccggat
gatcttattaccccttgtgatgaggatgctctagagaatggagatccgaaagttggcgaa
ggaaacgagaacgcaaaagtactacccctgggaaatgaggatgcggatatggaacatgag
aaaaaagatgagcaatcgagtattcccgccgttcccgtggcggaagtggaaacatga
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integrated database retrieval system
