Sclerotinia sclerotiorum: SS1G_05593
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Entry
SS1G_05593 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K10706
senataxin [EC:5.6.2.-]
Organism
ssl
Sclerotinia sclerotiorum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssl03021
]
SS1G_05593
Transcription machinery [BR:
ssl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
SS1G_05593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEN1_N
AAA_11
AAA_12
UvrD-helicase
AAA_19
AAA_30
Viral_helicase1
ResIII
AAA_22
DEAD
Motif
Other DBs
NCBI-GeneID:
5490217
NCBI-ProteinID:
XP_001594163
UniProt:
A0A1D9QAV1
A7EJU8
LinkDB
All DBs
Position
Unknown
AA seq
2021 aa
AA seq
DB search
MPDEADIMDELHGLNGELKSFPAGAHWFCPKRNDEDYVDYSRPDDAEEDMSAETKKELIQ
DAQRRQTVAYKYSLIIGLDPDSGGPMVEDYLERLNKLLTCCDKCVHNWHIGRKAYLKELA
ESFDDETVAELSNRLNAIDFQRIDNGLRSSKKVISDVESPMRTQKLLAGYDSSLLLSLYE
SLCCVDYHKSEDNLSKHFDFVFEEIQAKKVLRISDILPATGRFLFDKNVIRLRFARCAWQ
KATTMLTPESFEWVVHDTLSEAIISVTQGNYDYDDIIRFWEGFLLILDKLDEHLITHSLR
AMEVQPNVYMLALNHLTCKSERIGQLVIEVLRGLLKKSPKNFWAAFNTISPATIAENIFR
GGGFEGMLCRINFEDPEISFALAWIPELVESLPSDRQYDACSFLLEFLLRRYQKTTWPEN
TRLACCCVALDTLRATLNTFVDSEYNINPSTSLIFINNIMGLVDQYKETIARSADLNMAD
ATHQEMRRLGMLVVRDALALDCKSLSAEFQALAQNIPIQQGLRSHSQPIWQAVLDIFRPG
NVDLAKSILAATTHLTGLDELTPQTKKSPLPPSHLQYNKDFHQLTENVSRIFERLSDFDA
SHLIEMYRDPQTSRPLFAALLSADQEIFEAAVEVVKAATGQVSKREAMSSLLEQAFVPML
NSLTFATVRVTKAKNFSPVPYLIKVGRDMLNALCGNTGYLRNHPSLDSTERGAVMSWWIN
QWRALDMTFSNTESWGGRVQRSKEYLQDFCRDGMEYAESLFNQYSIIASALSESPGLSND
ESTAHSSSKSALKKVLQVVCLNVNGLTMMLRLRDIYLVSVITSLLGKLLRSLAEFDVEVH
QYALGYIQDACRNDNDSKYRKTNLTNQQKAELNAALDEHKGLEVIEIHPTTAKKQQSRID
SWSKSAEGAKHEPTISIKGRQTQTSLDTWSKAGDGKTYEPVITQSNKASQAPFTLSEHHK
SIIDQMRAQPQLKNVQATEDWKEKRRKDAEDRKKRDAEAVALAKALRAPTALVKGEGSGL
KNLSGVAGKDHAPVRSEIMVGSSDEDSDDDDDDGSDTNLLFSKSREASKTVKEYEESRKK
ALLQAAAGPVRKTKKVYSKKDLRARLEPNMDIIYLELLNWDIFHEGEDPPSNNVCRKIAN
SFLDLGLYKDTFKPLLISEVWRSLLTAKEENNYKPIEIKVLNRLSVDKFMEVSTTMSISN
QRDLMVYQQDIVLLSKSSNPLQDKQAPHCLARVFKTTRKRDAVEVTYRVSRDISPELLNC
FVPNGKLHTLKITDMTTTLREFAALSSLEYYDLCTEIMEAKPSPLQKYSDEKVASISTRY
KLNNGQAKAILSANDNDGFTLIQGPPGSGKTKTIIAMVGALLSQVLQQQAQQVGFRPQGQ
NGGAGAQAQAPKKKLLICAPSNAAVDELVLRLKEGILPLTGSHQKINVIRVGRSDAINST
VKDVTLDELVRIKLEGDQESKKGQLNDREKLHRDAGLIKERLNVIRPEMEKCRAEGDRTS
EQKLQREFDELKRKQAHIGNKIDEDKESDNKVRQNEISRRHFTQEIIDGAHVLCATLSGS
GHDFLRNVNVEFETVIIDEAAQCIELSALIPLKYGATKCILVGDPEQLPPTVLSRLAKSY
GYEQSLFVRMQRNHPKDVHLLDTQYRMHPEISQFPSQQFYNSRLIDGDGMAQLRVQPWHA
SSILGPYRFFDVVGVQSKETKGHSLINVPELNAAIQLYQRLKTDYRSYDFRGKIGIITTY
KAQLNELKRRFGAKFGDEIFEEIEFNTTDAFQGREREIIIFSCVRAKAAGGIGFLNDIRR
MNVGLTRAKSSLWVLGDSRALEQGEFWNRLIQDARSRSRYTSGDIMGLLSKPTSKDAPVI
DYSQLSSNVNGNISRRSSEKSDSDIDMTDAPQNQSSRGSGSGSSSTTPADSDDRMTPTNV
ETTEQRKRPREREPREENIPKKQKIPPPEVDHAPSASAIINRGSAEPQRGAQKLDLEAAL
QAQQATKAAAAARAPKPNLPHPPRRKAPADPFIQRKPAKRK
NT seq
6066 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgaagcggatatcatggacgagctccatgggctcaatggagaactgaagagc
ttccctgccggtgcgcattggttctgtcccaagcggaatgacgaagattatgtcgactat
tcccgcccagacgacgccgaggaggatatgagtgcagaaaccaagaaggaacttatacaa
gatgcccagcggaggcagactgttgcatataaatattctctcattataggattagatcct
gattcaggtggccccatggtagaagactaccttgaacgtttaaacaaacttttgacgtgc
tgtgataaatgtgtgcataattggcatataggtcgcaaggcatatctgaaggaactagca
gagagtttcgatgatgaaactgtcgcagagctttcgaaccgcctgaacgctatcgatttt
caacgtatagataatgggctaaggtcaagcaagaaagtcatatccgatgtggagtctcca
atgaggacgcagaaattgcttgctggatacgactcctcccttcttttgtctctctacgaa
tcactttgttgcgtcgattaccataaatctgaggataacttatcgaagcacttcgatttc
gtctttgaagaaatacaagcaaagaaagtcttgagaattagcgacatattaccagctaca
ggacgttttttattcgataagaatgtcatacgactccgatttgctaggtgcgcctggcag
aaagctactactatgcttacgcccgaatcattcgaatgggtcgtacatgacacactgtcg
gaagcaattatttctgtgacccaaggaaattacgattacgatgatatcatacgcttttgg
gaaggattccttttgattttagacaaactagatgaacacctcataacacattctctccga
gcaatggaggttcaaccaaatgtgtatatgcttgcactcaaccacttaacttgtaaatcg
gaaaggatcggtcagctagttatcgaagtgcttagaggcttactcaagaagtccccaaag
aacttctgggctgcatttaatacaatctcgccagccaccattgcagaaaacatttttcgg
ggtggtggctttgagggaatgctttgcagaataaactttgaagacccggaaatctctttt
gcactggcgtggatacctgaacttgtggaatcacttccttctgatcgtcaatatgatgct
tgcagcttcctgcttgaatttcttctacgacggtatcaaaagacgacgtggccagagaac
accaggcttgcttgttgttgcgtagcactcgatactctccgtgccactttaaacaccttt
gtcgactcggaatacaacatcaacccctcaacgtctcttatattcatcaataacatcatg
gggcttgttgaccaatacaaggagacgattgcgagatctgctgatctgaatatggccgac
gctacacatcaagaaatgaggaggcttggtatgttagtggtacgggatgctttggcgctt
gattgcaaatctttaagtgcagagttccaggctctcgcgcaaaatatcccgatacaacag
ggccttagaagccattctcaaccaatttggcaagctgttcttgacatttttagaccagga
aacgtagatttggccaagagtattcttgcggcaacaactcacctcaccggcttggatgaa
ctcacaccacagacgaagaaatcaccccttcctccctcccatctacagtataacaaggac
tttcatcaactaaccgagaacgtgtctagaatttttgagcgccttagtgattttgatgca
tctcatttgatcgagatgtaccgggaccctcagacttctcgtccactgtttgcagccctg
ctctctgctgatcaagaaattttcgaagctgctgttgaggttgttaaagctgcaacaggc
caagtaagcaagcgagaagctatgtcgagcttgttggagcaagcatttgtaccgatgttg
aattccctgacatttgctaccgtccgagtcacaaaggcaaaaaacttctcccctgttcca
tatctaattaaagttgggcgggacatgctcaatgctctatgtggaaacacaggatatcta
cgaaatcatccttctttggattctacagaacgaggcgctgtaatgtcttggtggattaac
cagtggcgtgctcttgatatgacgttctccaacacagaatcatggggaggtcgtgtacaa
cgctcaaaggaatacttgcaggatttttgccgagatggcatggaatatgcagagtctttg
ttcaaccaatatagtatcatcgcctctgctctaagcgagtctcctggcttgtctaatgat
gaatcgacagcccacagctcgtcaaagtctgcactgaagaaggtattgcaagtcgtttgc
ctgaatgtgaacggtctgaccatgatgctcaggctgagagatatctatctagtcagcgtg
atcactagtcttcttggaaagcttcttcgatcattagcagagttcgatgtcgaggtccat
cagtacgcactaggatatatacaagatgcatgcagaaatgacaacgattcaaaatacaga
aagaccaatcttactaatcaacaaaaggccgagttaaatgctgctcttgatgagcataaa
ggtttggaggttatagaaatccaccctacaacggctaagaaacagcaatcaagaattgat
tcatggtctaagtcagcagaaggtgcaaaacatgagccgacaattagcattaagggacgc
caaactcaaacgtcgctcgatacttggtcaaaagctggagacggcaaaacatatgagcca
gtcatcactcaatccaacaaggcatcacaggctccctttacgctttctgagcatcataag
agtatcatagaccaaatgagagcacagccacaactgaaaaacgtccaagctaccgaagat
tggaaggagaaacgccgtaaagatgcagaggacaggaagaagcgggacgcagaagctgtt
gctctagcgaaagcccttcgtgccccaacggccttagtaaagggtgaaggatctggtcta
aagaacttgagtggtgtagcaggtaaagatcatgcgcctgttcgaagtgagataatggtg
gggtcatcagacgaagattcggatgatgatgatgacgatggttccgacacgaacttactt
ttcagcaaaagccgggaagcttcgaagacagtcaaagagtatgaagaaagcaggaaaaag
gctcttttacaagcggcggcgggtccagtacgaaagaccaagaaggtgtactcaaagaag
gatcttcgtgctcgtttggagccaaacatggatatcatatatctcgagttactcaattgg
gacattttccatgagggcgaggaccctccaagcaacaatgtttgtaggaagattgcgaac
agcttcctcgacctcggactctataaggataccttcaagcctttgctcatatcggaagta
tggcgatcattgctaacagccaaagaagagaacaactataagcctatagaaataaaggtt
ctgaatcgtctgtctgttgataagtttatggaagttagcactaccatgtcgatttccaat
caaagagacctcatggtgtaccaacaagacattgtactcctttctaaaagctcaaatccg
cttcaagacaagcaagcaccacattgcctcgcacgtgtttttaagacaacccgtaagcgg
gatgcagtggaggtcacatatagagttagtagggatattagccctgaacttctgaattgt
tttgtgcccaacggcaaattacacaccctcaaaatcactgatatgacgacaactctgcga
gagtttgcagccctgagcagtctcgaatactacgacttatgcaccgaaattatggaggca
aagccttctccgttacaaaaatattccgatgagaaagttgcttcgatttcgaccaggtat
aagctcaataacgggcaagccaaagcaattttgtccgcaaatgataatgacggttttact
ttgatccaaggtcctcctggatcaggaaaaactaagactattattgcgatggtcggtgct
ttgctctcccaagtgcttcagcagcaagcacaacaggttggcttcaggccacaaggtcaa
aatggcggcgcaggcgcccaagcccaagcacctaagaaaaagctacttatctgcgctccc
agtaacgctgctgttgatgaattggtcctcaggttgaaggagggaatcttgcctctcacc
ggctctcatcaaaagattaacgtcatccgtgtcgggcgaagtgatgccatcaattctacc
gtgaaggatgtcacgcttgatgaattggttaggatcaagctcgaaggtgaccaagagtcc
aaaaagggtcaattgaatgaccgggagaagctacacagggacgcagggcttataaaagag
agactcaatgtcataaggcctgaaatggagaagtgccgtgcagaaggtgacagaacctcg
gaacagaaactgcaaagagagttcgacgagcttaagcggaagcaagcacacattggtaac
aaaatcgacgaagataaggaaagcgacaacaaggttcgacaaaatgagatcagtagacgt
cattttacgcaggagattatcgatggcgcccatgttctgtgtgctacactcagtggatct
ggacacgattttctgaggaatgtcaatgttgaattcgagacggttattattgacgaggct
gctcaatgtattgaactcagcgctcttatacctctcaagtatggtgctacgaaatgtatc
ttggttggagaccctgagcaactgcctccaacagttctctcgcgactagcaaagagttat
ggctacgaacagagtcttttcgtccgaatgcagcggaaccatcctaaagatgttcaccta
ctggacactcagtaccgcatgcatcccgagatcagtcaatttccaagtcaacagttttat
aacagtcgtctcattgatggtgatggaatggcacagttgcgggttcagccatggcacgca
agctccattcttggaccttatcgattttttgatgttgtgggtgtacaaagcaaggaaacc
aagggacattcgctcatcaacgttcctgagttgaatgctgctatccagctttaccaacga
cttaagacagattacagatcttatgattttagaggtaaaattggtattattacaacctac
aaggctcaattgaacgagcttaaacgacgttttggtgcgaaattcggagacgaaattttt
gaagagattgaatttaatacgactgatgctttccaaggtcgagagcgagagatcatcata
ttttcttgtgttcgtgccaaggctgcaggaggtattggtttcctaaacgacatccgacgt
atgaacgtgggcctgactagagccaaatcgtccttgtgggttcttggagattctagggca
ttggagcaaggtgaattttggaacaggcttattcaagacgccaggagccgtagcagatat
acaagtggcgatatcatgggattgttgtcaaagccgacgtctaaggatgcaccagtgata
gactattcacaactgtcctctaatgtcaacggcaatatctctaggcggtcgtctgagaaa
agcgacagcgatatcgacatgacagatgcgccacaaaatcaaagttcacgcggatcagga
tcgggtagtagtagcacaacaccggcggatagcgatgataggatgacaccgacaaatgtc
gagacgactgagcagagaaagcggcccagggaacgagaacctcgagaagaaaatattccg
aaaaagcagaagattccacccccggaagtagatcatgcaccatcagcctctgccataatc
aaccggggctcagccgaacctcagcgaggtgctcaaaaactggatctggaagctgcactt
caagcacagcaggcaactaaagctgctgcggcggcgcgtgcaccaaagcctaatctaccc
catcctccgcgtaggaaggcgccagcggacccctttattcagcgtaaaccagcaaaaaga
aagtga
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integrated database retrieval system
