Sediminispirochaeta smaragdinae: Spirs_1015
Help
Entry
Spirs_1015 CDS
T01287
Name
(GenBank) TonB-dependent receptor plug
KO
K02014
iron complex outermembrane recepter protein
Organism
ssm
Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_1015
Transporters [BR:
ssm02000
]
Other transporters
Pores ion channels [TC:
1
]
Spirs_1015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
ADK80148
UniProt:
E1RCR8
LinkDB
All DBs
Position
complement(1059332..1061314)
Genome browser
AA seq
660 aa
AA seq
DB search
MNHRFIPIAILVFVLISLWLVPIWAEEETENGEASKISVVVTANRIPTKESETTAEVTVI
TAGEVQESGVTSIVDLLERVPGIQFRSDSTTAKSQISMGGFGESSFGRVVVMVDGKRLNN
PDMSSINWQSISLESIERIEVLHGGGSVLYGSGAIGGVINIITKKQSDPLSLSISSTLES
YQSFKEAISAGIARGNGSLSVSGDYYSSDGYRDSSEQQAAHGKITGNLYPTSKLVLDLGL
GYSYNYYQMPGGLTKDQLEDDPTEAVNHADESTEHILSADLHGEYQATDKLLFDTLLGYE
YKNFSPDMPSWGSYYYDNIYHSLSFQPQASFETTAEGHYPITMVSGIDTRYSYLDSSTYD
SAERNNATAETEVSLLSLGGYTNLEVKIGDSIGASGGFRFDGADIFTDDDNAWHIGPAWS
IGLRWNPDENSKLYLRHERVFRYPFTDEQITYGTFLPDLEAEKGYLFETGGSIKISSLLE
IKGRAYLNLMKHEIVYNTATSQNENLDETRRIGGETELTLKPKPWLTMSGSYAYVLPTFI
HGDNEDKEIPLVSKHVAGASLLFALPHRLETELGTSYRGSSYQGGDNANTQEKVDGYVIV
DASLRWKPTTRMGNLTIIFSVDNLLDENYASYVYYNSWSDTSSYYPGQGRSCTLSGRYSL
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatagattcattccgatcgccattctcgttttcgtccttatatctttatggctc
gttcccatctgggccgaggaagagacagaaaacggagaagcatcaaaaatcagcgttgtc
gtaaccgcaaacaggattccgacgaaagagagcgaaacgaccgcggaggtgaccgtcatc
actgccggagaagtacaagaaagcggggtcacatctattgtcgatctgctggaaagggtc
cccggaatccagttccgcagcgattcgacaacggcaaagagccaaatttccatgggcgga
ttcggagaaagttccttcggcagggttgtggtaatggtggacggaaaacggctcaacaat
cccgatatgagctcgatcaactggcagtctatctccctggaatccatcgagcggatcgag
gtcctccacggtggggggtcggtactctacggaagtggagcaataggtggcgtcatcaat
atcattacaaaaaagcaaagcgatcccctgtctctgagtatctcgagcaccctggaaagt
taccagagttttaaggaagccatctccgccggcattgcgaggggaaatggatcgctcagt
gtcagcggagattattattcgagcgacggctatcgggatagcagcgaacaacaggcggcc
catggtaaaataacaggaaatctttaccccacgagcaagctggtccttgatctcggcctc
ggctacagctacaactattaccagatgccgggcggtcttaccaaggatcagttggaggat
gaccccaccgaggccgtcaatcatgccgacgaatctaccgaacacatcctctcggcagat
cttcacggtgaataccaggcaacggacaagctgcttttcgatactcttttgggctacgag
tataagaatttctccccggatatgccgtcatggggtagctactattacgacaacatctat
cactcgctaagttttcaaccccaggcaagcttcgaaaccactgccgagggacactacccc
atcaccatggtttccggaatcgacacgaggtacagttatctcgactctagcacatacgat
tcggccgaacgaaataacgccacggccgagacagaggtttctctcctttcccttggaggc
tacacgaatctggaggttaagatcggcgacagcataggggcttccggaggtttccgcttt
gatggtgccgatatctttaccgacgatgataatgcgtggcacatcggtccggcctggtcc
ataggcctgcgctggaaccccgacgaaaactcaaaactctatctgcgccacgaacgagtc
ttccgttatccctttactgatgaacagataacctacggaacattccttcccgacctggaa
gcggaaaagggctacctgttcgaaacagggggctcgataaaaatttcttccctgctcgaa
ataaagggccgggcctatctcaatctcatgaaacatgaaattgtctacaatacggccacc
tctcaaaatgaaaacctggatgagacccggagaatcggcggcgagacagagctaacgttg
aaaccgaaaccatggctgaccatgtccggctcttacgcctatgtgttgccgacctttata
catggggacaacgaagacaaagaaattccccttgtttccaaacatgtagccggagcatcc
ctgctctttgccctcccccatcggttagaaacggagctgggaacaagctaccgaggttcc
tcttaccaggggggggataatgccaatacccaggaaaaggtcgacggctatgttatagtc
gatgcatctttacgctggaaacccacaacacgaatgggtaaccttaccatcatcttttcc
gtcgacaatcttttggatgaaaactatgcatcctacgtctattacaatagttggtcggac
accagcagctattacccaggtcagggaagatcatgtaccctgagcggacgctatagcttg
tag
DBGET
integrated database retrieval system
