Sediminispirochaeta smaragdinae: Spirs_1301
Help
Entry
Spirs_1301 CDS
T01287
Name
(GenBank) hydrogenase large subunit domain protein
Organism
ssm
Sediminispirochaeta smaragdinae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fe_hyd_lg_C
FeS
Fer4
Fer4_7
Fer4_9
Fer4_10
Fer4_21
Fer4_6
PAS_8
Fer4_16
PAS_9
PAS
PAS_7
Fer4_3
Fer4_2
Fer4_18
Fer4_8
Motif
Other DBs
NCBI-ProteinID:
ADK80428
UniProt:
E1R406
LinkDB
All DBs
Position
1388903..1390630
Genome browser
AA seq
575 aa
AA seq
DB search
MKPAIYTEQAACQDCYKCVRECPVKAIEVKDGHAVVVQDLCLYCGHCVTVCPVGAKRMRE
DLPRAKLLLARRESCHISIAPSWVSEFPCSPGQMAAALLALGFRSAGETSIGAEVVSSAI
RRSFSDSLSLSTACPAVTELVEKYYPRLASHLSPWKSPMLAHALMLKQRYGDKAGVVFAG
PCIAKKQEGDKHEDCVDVVLTFDELRRWFDDAGIDLRSIEPASFDGMASRGGALYPVDGG
MIASIKERAQIIDATMISLSGTESIMRSLDDLGEQASGRPLFLEFLACKGGCINGPATDK
KRSLVSKRLRVIETAARRSKEGEAASSLAPVGDEKLSKRWQADRGVVRRHFSSEEIESAL
IRLGKERKEDRLNCGGCGYHTCADFAAAWIEGKAEKAMCVASMRRIAQKKMNAIIKAIPL
GVVIVDDEMNVVECNRKFLEFFSDFPPEEIDEVIIDNMVGRPAARFLPETEGIRRIQGGE
RELVEKRLEYRGRIMKVLIFIIERDRFTGVLFEDVTSLTKRRDTVIKNAEAVIAKNLATV
QQIAGLLGESAAETEIILSSLIDVFKSSGGGGEGR
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagcgatttataccgaacaggcggcctgccaggactgctataaatgtgtgaga
gagtgtcctgtcaaggctattgaggtgaaagacggccatgccgtggttgtacaggattta
tgtctctactgcggccattgtgtgacggtttgtcccgtcggggcgaaacggatgcgggag
gatctgccacgggcaaaactccttcttgcccgtagggaatcctgccacatctccatagcc
ccaagctgggtttccgaatttccctgctctcccggccaaatggcagccgccctccttgcc
ctcggctttcgctccgccggggagaccagtatcggggcagaggtcgtttcgtctgccatt
cgtcgttcgttttccgattccctttcgctctctaccgcctgccccgccgtaaccgaactg
gtggaaaagtactatccccggttggcttcccatctttctccctggaagagcccaatgctt
gcccatgcattgatgctgaaacagcgctacggcgataaggccggtgtcgtctttgccggt
ccctgcattgcaaagaagcaggagggagataaacatgaggattgtgtggatgtagtactt
accttcgacgagcttcgaagatggtttgacgatgcaggaatcgaccttcgaagtattgaa
cccgcctccttcgatggaatggcttcccgaggcggggccctctaccccgtggatggcggt
atgatcgcttccataaaagagagggcacagatcatcgatgccacgatgatctccctttcc
ggcacggagtcgatcatgcgaagccttgatgatcttggggaacaagcctccggcagaccc
cttttccttgagttccttgcatgcaaggggggctgtatcaatggtcctgcaaccgacaag
aagcggagccttgtttccaaacggcttcgggtcatagagaccgccgcccgaagaagcaag
gagggggaggctgcatcaagcttggcgcctgtcggagatgagaagctttccaagcggtgg
caagccgatcggggcgttgttcgccgacacttttcttccgaggagattgaatcggccctt
attcgtttgggaaaagagcgtaaagaggatcgcctcaactgtgggggctgcggttaccac
acctgtgccgattttgccgcagcctggatagaaggaaaggcagaaaaggcgatgtgtgtc
gcttcgatgcgccggattgcccaaaaaaagatgaacgccatcataaaggcgattcccctg
ggggttgtcatcgtcgatgacgagatgaacgtggtcgagtgtaatcgaaagtttctcgaa
ttcttttccgactttccccccgaggagatcgatgaggtcattatcgacaacatggtcggc
aggcccgctgcccgtttccttcccgagacagagggaatcaggcgaattcaggggggagaa
cgggaactggtggaaaaacggcttgagtatcgggggcggatcatgaaggtcttgatattc
atcatcgaacgggaccgttttaccggggtcctttttgaggatgtgacgagcctcaccaaa
cggagggatacagtgatcaaaaacgccgaggccgtcatcgcgaagaaccttgcaacggtc
cagcagatcgcaggcctcctcggtgaaagcgccgccgagaccgagatcatcctttccagc
cttatcgatgtctttaagagttccggaggtggcggtgagggcaggtaa
DBGET
integrated database retrieval system