Sediminispirochaeta smaragdinae: Spirs_3970
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Entry
Spirs_3970 CDS
T01287
Name
(GenBank) signal transduction histidine kinase
Organism
ssm
Sediminispirochaeta smaragdinae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HisKA_2
dCache_1
HATPase_c
HATPase_c_2
PAS
PAS_4
HAMP
PAS_9
HWE_HK
PAS_8
HATPase_c_3
PAS_3
Motif
Other DBs
NCBI-ProteinID:
ADK83055
UniProt:
E1R986
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Position
4286681..4288750
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AA seq
689 aa
AA seq
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MDILPLFGSKRRRGIRSLLTLVLFPLMVPSILLFSIIMYRTTSDILLRQIRQDNEFLARS
IQREISLFLEGATAMTQTITKESIWLRNEGSNDYERLLSSLLETIPPFRRLTIVSASGDV
VTTVPYDENFIGSNLGNTTFFRTVKADQIGYWSNSFISSITSEPTICYGVPFEQGVLMAD
LNLDILSAFVQDVRQSGNRSILITDKTGTVIAFENKTLVEQQHKLFSDHQTRPSEILKIA
GTRYFSRRLVIEKTGWPLYVLSPADEFFSPVHTLGFTIIIVTVIFSIFLIGIILFLGRRI
VNPIEALTRQAQLIADGRYEVNGEKSFREAEALLNAMKTMAERIRTRELALQKSEQTYRL
LVENAQTIIIRWNKEGFITYYNEFAARFFNFDSTIQPIPLARITIANDPILFADIWNDPE
SFSSYKNINHKGNGELAWIQWTSMPLRNEKGDLVEILSVGSDITRLQKAIREKEVLLEEV
HHRVKNNLQLIISLLNLKQSQLRGSAEAVGFHESIAHIYSISLVHEQLYQSNSFDHIELE
PYLLAVVGHLAEMHTVNGRAISFTVDANNLNLSVEQAMPCGLILTELVCNALRHAFSDAK
KAHISIKGNRDKREMVELTVSDNGKGFPRSLFSKKRSLGFQLVHLLVEQLNGSVCCYGEE
GTTFFISFPEIKDSSLVSAGKGGEITSAR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacatattgccactattcggtagcaaaagacggcggggcatcagaagcttgctcacc
ttagtactttttccgctgatggttccctcaatcctgctcttctccatcatcatgtacaga
accacatcggacatcttactacggcagattcggcaggataatgaatttcttgcccgctct
atccaaagggaaatttcactttttttggagggagcaacggccatgacacaaacaattaca
aaagagagcatctggttgcgaaatgagggatcaaatgactacgaaagacttctctcctcg
ttgcttgaaacgattcccccttttagacgactaacgattgtaagtgcctcaggcgatgtc
gtgaccaccgttccctacgatgagaattttatcggcagtaatttgggaaacaccacgttc
tttcgtaccgtgaaagcagatcagatcggatactggagcaactctttcatctcttcaatt
acatcggaacctacaatctgctacggtgttcccttcgaacagggcgtgctcatggcagat
cttaacctggacatcctgtcggcatttgtacaggatgtcagacaatcaggaaatcggtcg
atccttataaccgataaaacgggaacggtcatcgcctttgaaaataaaacattggtggaa
caacagcataagcttttttcggaccatcaaacgcggccatcggaaattcttaagatcgcg
ggaacccggtacttctcccggcggctggtcatagaaaagacgggttggcctctttatgtt
ctctctcccgcagatgaattcttttctccggtacacaccttaggtttcaccattattatt
gtaaccgtcatattttcgatcttccttatcgggatcatccttttccttggaagacgtatc
gtcaaccccattgaagcattaaccagacaagcacaattgatagcagatggcaggtacgag
gttaatggcgaaaagagcttcagagaagcggaggctcttctcaatgcgatgaaaaccatg
gccgaacgaattcgaaccagagagttggcgctacagaagagtgagcaaacctaccgccta
cttgtagaaaatgcccagaccatcatcattcgctggaacaaggaaggtttcatcacctat
tataacgaatttgccgcccgctttttcaatttcgatagtaccatacagcccattcctctc
gcccgcataacaatagcaaacgaccctatcctattcgccgacatctggaatgatcccgaa
tccttctcctcttacaaaaatataaatcataagggcaacggagagcttgcatggattcag
tggacttcaatgccgcttcgaaacgaaaagggagatctcgtcgaaatcctttcggtcgga
tcggatatcacccgtcttcagaaagcaattcgggaaaaagaggtactccttgaagaggtg
catcacagggtaaaaaacaatctacagttgatcatcagtcttctcaatctcaagcagtca
cagcttcgtggttcggcagaagccgtaggttttcacgagagtatcgctcatatctattcc
atcagcctcgttcatgaacagctataccagagtaatagtttcgatcatatagaattggaa
ccctatcttctggccgttgtggggcatctcgccgaaatgcatacggtaaacggccgcgcg
atttcctttacagtcgacgcgaacaacctcaacctttctgtcgagcaggccatgccctgt
ggccttatccttaccgaactggtttgcaacgctcttcgtcatgctttctcggacgcgaag
aaggctcacataagcatcaaagggaatcgtgataagcgcgaaatggtggagctcacggtc
tccgacaacggaaaaggatttccgaggagtttattcagcaaaaaacgctctttgggattc
caactggtgcatctacttgtagagcaactcaatggatcggtttgttgctatggagaagag
ggcacaacctttttcattagcttccccgagataaaggattcaagcttggtctcggccggc
aaaggcggagagattacctccgcacgctga
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