Sediminispirochaeta smaragdinae: Spirs_4143
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Entry
Spirs_4143 CDS
T01287
Name
(GenBank) ABC transporter related protein
KO
K23537
general nucleoside transport system ATP-binding protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_4143
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_4143
Transporters [BR:
ssm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
Spirs_4143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_29
RsgA_GTPase
AAA_15
AAA_23
AAA_22
nSTAND3
AAA_16
AAA_30
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ADK83223
UniProt:
E1R9Q4
LinkDB
All DBs
Position
complement(4480608..4482137)
Genome browser
AA seq
509 aa
AA seq
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MGSESNGKVILETRHVVKQFPKVLANDDISIILKEGEILSLLGENGAGKSTLMNVLYGLY
QPTSGEMLLDGKRVQFDSPKDAIRLGLGMVHQHFMLVETLTVTENIILGAEPGNGAVIDY
RKARQEVSALSEKYGLKVDPDAKIETLSVGLQQRVEILKALYRKAKILILDEPTAVLTPQ
EVEELFDVIKELRKGGVSLIIITHKLEEVMEISDRVYILRRGKIEGERATKECTKEELAN
LMVGRSVVLTVEKKPKAPGSEDVFRIENLKVLNDKEFPAVNDLSLHVRPGEVVGIAGVDG
NGQTELAEAIMGLRPVADGRIFHHGDDITGMSTKALIGRSISYVPADRQRFGLVLPMTVS
ENIAIGYHDRVPNVRGINLNFRAMDEYATELVERFDIRPPAVDVKAGNLSGGNQQKVILA
REFSRKPTFLLVSQPTRGLDVGAIEYIHNQILAMRDQNVAILLISLELEEIFSLSDRIIV
LYEGKVVKELSPEKTTEKQVGFYMTGGKE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggttccgaaagtaacggaaaggtgatcctggaaacccgtcacgtggtaaagcagttt
cccaaggtgcttgctaatgacgacatcagtatcatcctgaaagaaggggagatccttagc
ctcctcggtgaaaacggcgccggtaaatcgacgctaatgaatgttctctatggcctatac
caacccacttccggtgagatgctccttgacggaaagcgggtccagttcgactctcccaaa
gatgctattcgtctcggtctggggatggttcatcaacattttatgctggtggaaaccctt
accgttacggaaaacatcattctgggtgccgagcctggaaatggtgctgtgatcgattac
cgaaaggctcggcaggaggtgtctgccctttccgagaaatatggtttgaaagtcgatccc
gatgcgaaaatcgagaccctttcggtggggctccagcaacgtgttgaaatcctcaaggcg
ctctaccgaaaggcaaagattcttattctcgatgagccgacggcggttcttacccctcag
gaggtggaagagcttttcgatgtgatcaaggagctgcgcaagggtggggtttctcttatc
atcattactcacaagcttgaagaggtaatggagatcagtgaccgtgtctatattctccga
cgggggaagatagagggggaacgggcgacaaaagagtgtacgaaagaggagcttgcgaac
ctgatggtcggtcgaagcgttgtgctcaccgtcgaaaagaaaccaaaggccccaggaagc
gaggatgtttttcgtatcgagaatctgaaagtcttaaacgataaggaatttcctgcggtc
aacgatctttctcttcatgtccgtcccggagaggtcgtcggtatcgccggtgtggacggt
aacggtcagacagagcttgccgaggcgatcatgggactgcggcctgtggcggacggaaga
atttttcatcatggtgacgacattaccggcatgagtaccaaagcgttgatcggacgaagt
atttcctatgttcctgccgatcgacaacgtttcggccttgttttgcccatgaccgtaagc
gaaaacatcgctatcgggtatcacgatcgtgttcccaacgtacggggcattaatttaaac
tttcgtgcaatggacgaatatgcgacagaacttgtcgagcgttttgatattcgtcctcct
gcggttgatgtgaaggccggtaacctttccggtggtaatcagcagaaggtcattcttgcc
agagaattttcccgtaaaccgacctttcttctggtaagccagcccaccaggggccttgat
gtcggagccatcgagtatatccacaatcagatcctggcgatgcgggaccagaatgttgct
atcctgctgatcagtcttgagcttgaggagattttctccctttccgatcgtatcattgtt
ttatatgaaggaaaggtcgtaaaggagctgtctcccgaaaaaaccactgaaaaacaggtc
ggtttctatatgaccggcggaaaggagtag
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