Staphylococcus saprophyticus: SSP1396
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Entry
SSP1396 CDS
T00269
Name
(GenBank) putative transcriptional repressor of ribose operon
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ssp
Staphylococcus saprophyticus
Brite
KEGG Orthology (KO) [BR:
ssp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssp03000
]
SSP1396
Transcription factors [BR:
ssp03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SSP1396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_4
Peripla_BP_1
HTH_Tnp_ISL3
HTH_23
HTH_17
Motif
Other DBs
NCBI-ProteinID:
BAE18541
UniProt:
Q49XF6
Structure
PDB
LinkDB
All DBs
Position
complement(1438710..1439675)
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AA seq
321 aa
AA seq
DB search
MATIKDVATLAGCSVATVSRAINNNGYVKAKTRLHIEEAIAELNYQPNEAARTLYKRKSK
LIGLLLPDMSNPFFTLIARGVEDVALAHGYQVLIGNSDNDIKKAQGYLATFVSHNCTGMI
STAFNENIIENTLTDHHIPFVFIDRINNEHNGISTNHFKGGQLQAEVVRKGKGKNVLIVH
ENLLIDAFHQRVQGIKYILDQQRIDYKMLEATLLDNDKKFIDLIKELSIDSIICSNDLLA
INVLGIVQRYHFKVPAEIQIIGYDNIPFSEMTYPQITTIDQSAYHLGEIAVSQLLGLNTD
NLTNNHKQLALTVKHRGSTRN
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgattaaagatgtagcgactttagcaggatgttctgtagcaactgtctcaagg
gcaattaataacaatggttatgttaaggcaaaaacacgacttcatatagaagaagcaatt
gccgaattaaactaccaaccaaatgaagcagcacgcacattatataaaagaaagtctaaa
ctaataggtttattactgccggatatgagtaatcctttttttacacttatcgctcgtggc
gttgaagatgttgctttagcacatggttaccaagtacttattggtaatagtgataatgat
ataaaaaaagcacaaggctacttagcaacattcgtatcacacaattgtacaggcatgata
tctacagcatttaatgaaaatattatcgagaacacactgactgatcatcacattccattt
gtttttatagatcgtattaataatgagcataatgggatttcaacgaatcactttaaaggt
ggtcaacttcaggcagaggtagtacgaaaaggtaagggtaaaaacgttttaatcgtacat
gaaaatttattaatcgatgcatttcatcaacgcgtccaaggtattaagtacatattagat
caacagcgtattgattataaaatgttagaagcaacgttattagataatgataaaaaattt
attgacttaattaaggaacttagcatcgacagtattatttgtagtaatgatttattagcg
ataaacgttttaggcattgtacaaagatatcattttaaagttccagcagaaatacaaatt
attggatatgataatattccattttcagaaatgacctatccacaaattactactatagat
caatcagcatatcatttaggtgaaattgccgtttcccaactattaggtttgaatacggat
aatttaacaaacaaccataagcaattggcacttacagttaaacatagaggaagtacacgt
aattaa
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