KEGG   Streptococcus suis D9 (serotype 7): SSUD9_1832
Entry
SSUD9_1832        CDS       T02022                                 
Symbol
uvrA
Name
(GenBank) UvrABC system protein A (UvrA protein)
  KO
K03701  excinuclease ABC subunit A
Organism
ssq  Streptococcus suis D9 (serotype 7)
Pathway
ssq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ssq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SSUD9_1832 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssq03400]
    SSUD9_1832 (uvrA)
DNA repair and recombination proteins [BR:ssq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SSUD9_1832 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SSUD9_1832 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase AAA_21 BCA_ABC_TP_C AAA_22 nSTAND3 AAA_33 AAA_23 ATPase NACHT AAA_18 AAA_25 AAA_14 Viral_helicase1 SLFN-g3_helicase DnaJ_CXXCXGXG MMR_HSR1 DUF87 cobW T2SSE NB-ARC NTPase_1 AAA_24 Septin MeaB RACo_linker DUF4350 IIGP DUF463 RNA_pol_Rbc25 SF3a60_Prp9_C
Other DBs
NCBI-ProteinID: AER18000
LinkDB
Position
complement(1804305..1807130)
AA seq 941 aa
MQENIVIHGARAHNLKNIDVTIPREKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSA
YARQFLGNMDKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTATEINDYLRLLYARVGVPY
CINGHGAIAASSVEQIVDEVLELPERQRLQILAPIVRKKKGQHKTIFEKVQKDGYVRVRV
NGDVYDVSEVPELSKSKAHNIEVVVDRIVIKEGIRSRLFDSIEAALRIADGYVIIDTMDE
KELLFSEYYACPVCGFTVPELEPRLFSFNAPFGSCSDCDGLGMKLEVDMDLIVPDASKTL
RDGALAPWNPISSNYYPQMLEQAMNHFGVDMDKPFEELTEEEKNLIFNGSDGKEFHFHYE
NEFGGVRDIDIPFEGLITNINRRYRETNSDYTRTVMKTYMNELTCGTCHGYRLNDQALSV
KVGGEQGLHIGQLSDLSVADHLQVIEHLTLSENEAIIATPIVKEIKDRLSFLNNVGLNYL
TLSRAAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDLG
NTLIVVEHDEDTMREADWLIDIGPGAGVFGGEIVASGTPAQVAKNKKSITGQYLSGKREI
PVPLERRVGNGRFLEVTGAKENNLQDVTVRFPLGKFVAVTGVSGSGKSTLVNSILKKAIA
QKLNRNSDKPGKFKSISGIEHLDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVFVPCEVCHGHRYNSETLEVHY
KEKNIAQVLDMTVNDAVEFFKHIPKIERKLRTIQDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSLYILDEPTTGLHTEDIAQLLKVLARFVDDGNTVLVIEHNLDVIKTADH
IIDMGPEGGVGGGTVVATGTPEEVASNPASFTGQYLKMKLK
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgcaagaaaatattgtgattcatggggcgcgtgcccataatttgaaaaatattgatgtg
accattccgcgtgagaagttggtggtggtgactggtttgtcaggctctggtaagtcgagt
ttggcttttgataccttgtatgccgaaggccaacgccgctacgtagagtccttgtctgcc
tatgctcgtcagttcttgggcaacatggacaagccagatgtggattccatagagggtctc
agccctgctatttccattgaccaaaaaacaacctcgcgtaatccgcgttcgacagtcggt
acagcgacggaaatcaatgactatctccgcctgctctatgctcgagttggggtgccttac
tgtatcaacgggcatggggcgattgcggcttcttcggtggaacaaatcgttgatgaagtt
ttggaattgccagagcgtcaacgcttgcaaattttggcgccgattgttcgtaagaaaaaa
gggcaacacaagactatttttgagaaggtgcagaaggatggctatgttcgggttcgtgtt
aatggtgatgtctatgatgtgtcggaagtgcccgagttgtccaagagcaaggctcataat
attgaagtcgttgtcgatcgaattgtgataaaagaaggtattcgctctcggcttttcgat
tctatcgaagcggccctgcggattgcggacggctatgtcatcatcgacactatggatgag
aaggaactgctcttctctgagtactatgcctgcccagtttgtggttttacggtaccagag
ttggagcctcgcctcttctctttcaatgctccttttgggtcttgtagcgactgtgacggt
ttgggtatgaagctggaagtggatatggatttgattgtcccagatgccagcaagaccttg
cgtgacggggctttggctccgtggaatcctatttcttctaactactatcctcaaatgttg
gagcaggccatgaatcactttggtgtagatatggacaaacctttcgaggaattgacagaa
gaggagaagaacctgattttcaacggttctgacgggaaagaattccatttccattatgaa
aatgagttcggtggggtgcgtgatattgacattccattcgagggcttgattaccaacatt
aatcgccgctatcgtgaaaccaacagtgactatacgcggactgttatgaagacttacatg
aatgagctgacctgtggaacctgccacggctatcgcctcaatgaccaagccctgtctgtc
aaagttggtggcgagcagggacttcatatcgggcagttgtctgatttgtccgtagcggat
catttgcaagtgattgaacatctgaccttgtctgaaaatgaagccatcattgcaacaccg
attgtcaaggaaatcaaggaccgcctgtccttccttaataacgttggtctcaactatctg
actctttcacgagcagcaggtaccctttctggtggtgagagccagcggattcgtctggcg
actcagattggctctaacctgtctggtgttctttacatcttggatgagccatcgattggt
ctgcaccagcgggacaatgaccgcctgattgctagtcttaagaaaatgcgtgatttggga
aataccctgattgttgttgagcatgatgaggacaccatgcgtgaggcggactggttgatt
gacatcggtccaggtgcaggtgtctttggcggagaaatcgtggcctctggaacgcctgcc
caagtagctaagaataaaaaatccattacaggccaatacctgtctggcaaacgtgaaatt
ccagttcctttggaacgtcgtgttggcaatggtcgattcctggaggtaacaggtgccaag
gaaaacaacctgcaagatgtgactgttcgtttcccactcggaaaatttgtggcggtgaca
ggggtgtctggctctggtaagtcaactctggtcaattccattctgaaaaaagctattgct
cagaaactcaatcgcaattcggacaagccgggcaagttcaagtccatttcaggaattgaa
cacttggaccgcctgattgacattgaccaaagtccgattggacggacaccgcgttctaac
ccagctacctacacaggtgtctttgacgatattcgggacctctttgcccagaccaatgaa
gccaaaatccgtggctacaagaagggacgtttctcctttaacgtcaaaggtggtcgttgt
gaggcttgttctggtgatggtatcatcaagattgaaatgcacttcctgccagatgtcttt
gtaccttgtgaagtctgtcatggacaccgctacaattctgaaaccttggaagtacattac
aaggagaaaaatatcgcccaggtccttgatatgacggtcaatgatgcggtcgagttcttc
aaacatattccgaaaattgagcggaaacttcgcaccattcaagatgtaggcttgggctat
gttacccttggacaacctgcgacaaccctatcaggtggggaggcccagcggatgaaattg
gcatcggaacttcacaagcggtcgactggtaagtccctctatatcttggatgagccaacg
acaggtctacatactgaggatattgcccaattgctcaaggtcttggcccgctttgttgat
gacggcaatactgtccttgttatcgagcacaatctggatgtcatcaagacagccgaccac
attatcgacatgggaccagaaggcggtgtcggtggtggtaccgttgttgcaacaggaacg
ccagaagaagtagctagcaacccagccagctttacaggccagtatctgaaaatgaagttg
aaataa

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