KEGG   Streptococcus suis 05ZYH33 (serotype 2): SSU05_0542
Entry
SSU05_0542        CDS       T00514                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
ssu  Streptococcus suis 05ZYH33 (serotype 2)
Pathway
ssu03030  DNA replication
ssu03430  Mismatch repair
ssu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ssu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SSU05_0542
   03430 Mismatch repair
    SSU05_0542
   03440 Homologous recombination
    SSU05_0542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ssu03032]
    SSU05_0542
   03400 DNA repair and recombination proteins [BR:ssu03400]
    SSU05_0542
Enzymes [BR:ssu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SSU05_0542
DNA replication proteins [BR:ssu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SSU05_0542
DNA repair and recombination proteins [BR:ssu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SSU05_0542
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: ABP89508
LinkDB
Position
524022..527132
AA seq 1036 aa
MLAQLDTKTVYTFMDSMVTIESYVGRAKELGYHALGIMDKNSLYAAYSFMESCNKMGLQP
IIGCELDWKLQGEEQDITTQLIALTTRGYRNLLKISTAKMTGQDDFETIRQYLVDIAVVV
PYFSGIEHLELGVNYYIGVTVDTPVQDFKQAPLPIHTVRFFEEEQLESLQVLHAIRDNIP
LNQVSDVDSRQKLLSADSLTNLFSNRFPQAVDNLRDLVAGISYQLNTDLKLPRFNRDRPA
VEELYERSYQGLEEKGLTNSLYKERLEKELSIIHQMEFDDYFLIVWDLLRFGRSQGYYMG
MGRGSAVGSLVAYALNITGIDPVKHNLLFERFLNAERYSMPDIDIDIPDIHRADFIRYVR
DRYGSTHAAQIVTYSTFGAKQAIRDVFKRFGTPEYELSNITKKISFRDSLTSAYQRNAAF
RQIINSKIEYQKAFAIAQQIEGQPRQTSIHAAGIVMSDEELTDTIPLKIGDDMLVTQYDA
HAVEANGLLKMDFLGLRNLTFVQKMAEGVRERYQQEIDIAKIDLEDKKTLELFAAGRTKG
IFQFEQPGAISLLRRVKPGRFEDIVATTSLNRPGASDYSDNFVKRKHGQETVDLLDPTIA
PILQPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNAQEMQAMEAEFLQGALKN
GHAEENAREIFGMMAKFAGYGFNRSHAYAYSALAFQMAYFKSHYTDVFFDVMLNHSSSAY
IEDAMQFDFEVARLTINNIPYHDKFDKSKVYLGLKTLKGLPKDLALWILDHRPYKSVEDF
ILRLPDNFKKKDLLIPLIQIGLFDDFDANRKKIIENLDNLFVFAEAIGTFFAEESYSWTD
VEDYSDSEKFMLEQELLGVGISPHPLVNICRESKRSFTDLADLAVGNRATVLVQIQAIRL
IRTKKTGEQMAFLRVTDTKRTLDVTLFPESYRQYASILEEGGMGYITGRVQERDGQLQLV
LEKLEPVSLEKVWILLENREHDYAVARILDKYRGSIPVVLHYQDSNQTIQAEHHMVMKTP
QLEEELSEFVMKTIFR
NT seq 3111 nt   +upstreamnt  +downstreamnt
atgctggcacaattagatacaaagacagtttatacctttatggatagcatggtgacgata
gagagttatgtaggcagggctaaagagcttggttaccacgcattggggataatggataaa
aacagtctttatgcagcctatagttttatggaatcctgtaacaaaatggggcttcaacca
attattggttgtgaactggactggaaattacagggagaggagcaggacatcactactcaa
ttgattgctctgacaaccagaggttatcgcaatctattgaaaatttcgactgctaagatg
acagggcaagatgattttgaaactattcgtcaatatttagtcgacatagcagtggttgtt
ccttatttttctggcattgagcaccttgagttgggtgtaaactattatatcggagtgaca
gttgacacaccggttcaagattttaagcaagcaccccttccaatccatactgttcgtttt
tttgaagaggaacaattggaaagtctacaggttctccatgctattcgagataatattccg
cttaatcaggtttcagatgtagatagtcggcaaaagcttttatcggctgatagcttaacc
aatctattttctaatcggtttccgcaagcagttgataatttacgtgacttggttgcaggg
atttcttatcaattaaatacagatttaaaattgccgcgttttaatcgtgacagacctgca
gtggaagaattatacgagcgctcctatcaaggattagaagagaagggcttgactaattca
ctgtataaggaacgcttggaaaaggaattatccattattcatcaaatggaatttgatgat
tatttcttgattgtatgggacctacttcgttttggacgtagccaagggtactacatggga
atggggcgcggttcagctgttggaagcctagttgcctacgccttaaatatcacaggtatt
gatcctgttaagcataatcttctctttgaacgctttctcaatgctgaacgttattcaatg
cccgatattgatattgatattccagatattcatcgagcagattttattcgttatgtacga
gatcgttatggttcaacccatgctgctcaaattgtaacctactcgacatttggagctaag
caggctattcgtgatgtatttaagcgtttcggaacacctgaatatgagttaagtaatatt
accaagaaaatttcatttagagatagtcttacttctgcctatcagcgaaatgccgctttt
cgccagattatcaatagtaagatagagtaccaaaaagcttttgcgattgctcaacaaatt
gaagggcaaccccgacagacttctatccatgcagcagggatagtgatgagtgatgaggag
ttgacagataccatccctcttaaaataggggatgacatgctggtaacccaatatgatgca
catgctgttgaggcgaatggtctgttgaaaatggatttccttggcttacgaaatctgacc
tttgtgcaaaaaatggcagaaggagtacgtgaacgttatcagcaggaaattgatattgcc
aagatagatttagaagacaagaaaaccttggaactttttgctgctggtcggactaaggga
atttttcaatttgaacagcctggtgcgattagcctgcttcgaagggtcaaacctggtcga
tttgaagatatagttgcaacaacgagtttgaatagaccgggggctagtgattattcggat
aactttgtaaaacgcaaacatggacaagagacagttgatttgttggatccaaccattgct
cctattttacaaccgacttatggtatcatgctttatcaggaacaggtcatgcagattgca
caggtctatgcaggctttacgcttggcaaggcggatttactccgcagggcgatgtctaaa
aagaatgcgcaggaaatgcaggcaatggaagcggaatttttacagggagcactgaaaaac
ggacatgctgaagagaatgcaagggaaatatttggcatgatggctaagttcgctggttat
ggttttaaccgtagccacgcctatgcttattcagccttagcctttcaaatggcctatttc
aagagtcactatacggatgtcttttttgatgtcatgctcaatcattctagcagtgcttat
attgaagatgcgatgcagtttgactttgaggtagctcgactcacgattaacaatattcct
tatcacgataagtttgataaaagtaaggtttacctaggattaaaaacactgaaaggtttg
cctaaagatttagctttatggatattggatcatcgtccctataagtctgtagaagatttt
attttgcgcttgccagataatttcaagaaaaaggatttactaatccctcttattcagatt
ggtttatttgatgattttgacgccaatcgaaaaaagattattgaaaatctagacaatctc
tttgtctttgcagaggcaattggtacattttttgcagaggagagttatagttggacagat
gtagaagattacagcgacagtgaaaaatttatgctagagcaagaattgctaggtgttggt
attagtccgcatcctttagtcaatatttgtcgagagtctaagcgtagttttacagatttg
gctgatttagcggttggcaatcgagcgaccgttcttgtgcagattcaagctattcgattg
attcgtaccaaaaagactggggagcagatggcatttcttcgagtgacagataccaagagg
acgcttgacgtgactcttttccccgaatcttatcgccaatacgcttctattttggaagaa
gggggaatggggtacatcacaggtagagtgcaagagcgggatggacagttgcaattagtt
ctagaaaaattagagcctgtcagtttagagaaagtttggattcttttggaaaatcgagaa
cacgattatgctgttgctcgtattttggataaatatagaggaagcattccagtagtactt
cattatcaagatagtaatcagacaattcaggctgagcaccacatggttatgaaaacgcct
caattagaagaagagttaagtgaatttgttatgaaaacgatttttcgataa

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