Streptococcus suis T15: T15_0049
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Entry
T15_0049 CDS
T02891
Name
(GenBank) putative DNA-binding protein
KO
K20342
HTH-type transcriptional regulator, regulator for ComX
Organism
ssui
Streptococcus suis T15
Pathway
ssui02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssui00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T15_0049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssui03000
]
T15_0049
Transcription factors [BR:
ssui03000
]
Prokaryotic type
Helix-turn-helix
Other families
T15_0049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ComR_TPR
HTH_31
HTH_19
HTH_3
DUF6565
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AGZ22168
LinkDB
All DBs
Position
53251..54150
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AA seq
299 aa
AA seq
DB search
MNDKEFGQRVRQLRESASMTREQFCDDELELSVRQLTRIEAGTSKPTFSKIQYIATRLGM
GLYELMPDYVSLPERYSKLKFDVLRTPTYGNEELVEKRDAIMTEIYDDYYDELPEEEKIA
IDAIQSRIDTLESGTAGFGKEILEDYFEQIFRKRKYELNDLLIVRLHLEYVRLSSCDSEI
FRQFLKIIEHLHEQINIINSNDLFVLRDTLLSSVNILGSKKYYEPIPKIFDSVDKIIQST
QDFQKKPIVSVLKWKYALFVDKDRDEAEKHYLDAVLFAKLIENRELEQKIEEDWRVDNQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataaggaatttggacagcgtgtacgtcaattacgagaatctgctagtatgaca
cgtgaacagttttgtgacgatgaactggaactctctgtgcgccaattaactcgtattgaa
gcaggtacttccaagccgactttttcaaaaatccaatatatcgcaacccgcttaggcatg
gggctctatgagcttatgccagattatgtgtcgctacctgaacgatattccaaactgaag
tttgatgtcctccgtacaccgacttatggtaatgaggaattagttgaaaaacgtgatgct
atcatgacggaaatctatgacgattattatgatgaattgcctgaggaggagaagatagca
atagatgcgattcaatcacgaattgatactttagagtcaggtacagcaggctttggaaaa
gagatactggaagactactttgaacaaatttttcgcaaacgaaagtatgaattgaatgat
ttgttgattgttaggctccatcttgaatatgttaggttatctagctgtgattcagaaata
tttagacagtttttgaaaattatagagcatttacatgagcaaatcaatatcatcaactca
aatgatttatttgttctaagggatacattattatccagtgtaaacattttgggaagtaaa
aaatattacgaaccaataccaaagatatttgatagtgtagataagattatacagtcgaca
caagattttcagaaaaagcccattgttagtgtattaaaatggaaatatgcactttttgtg
gataaggatcgggatgaggcagaaaagcattatctagatgcggtgctatttgcaaaattg
atagaaaatagagagttagaacagaagattgaagaagattggagagttgacaatcaataa
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