Streptomyces sp. SirexAA-E: SACTE_1381
Help
Entry
SACTE_1381 CDS
T01601
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
ssx
Streptomyces sp. SirexAA-E
Pathway
ssx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SACTE_1381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssx03400
]
SACTE_1381
DNA repair and recombination proteins [BR:
ssx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SACTE_1381
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SACTE_1381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_22
HAMP
AAA_5
UB2H
AAA_16
DUF87
Helicase_RecD
HEM4
AAA_7
nSTAND3
AIG1
Motif
Other DBs
NCBI-ProteinID:
AEN09299
UniProt:
G2NAP8
LinkDB
All DBs
Position
complement(1544235..1546373)
Genome browser
AA seq
712 aa
AA seq
DB search
MRPVSQIERSVAPFEVVSPYQPSGDQPAAIAELDRRIRAGEKDVVLLGATGTGKSATTAW
MIEKLQRPTLVMAPNKTLAAQLANEFRELLPNNAVEYFVSYYDYYQPEAYVPQSDTYIEK
DSSINEEVERLRHSATNSLLTRRDVVVVASVSCIYGLGTPQEYVDRMVQLKVGDEIDRDQ
LLRRFVEIQYTRNDLAFTRGTFRVRGDTIEIFPVYEELAVRIEMFGDEIEALSTLHPLTG
EVISEDSSLHVFPASHYVAGPERMEKAIGGIERELEQRLAELEKQGKMLEAQRLRMRTTY
DIEMLRQIGTCSGVENYSMHFDDRSPGTAPNTLLDYFPEDFLLVLDESHVTVPQIGAMYE
GDASRKRTLVDHGFRLPSALDNRPLKWEEFLKRIDQTVYLSATPGKYEMSRGDGYVEQII
RPTGLVDPEVVVKPTEGQIDDLVHEIRKRTEKDERVLVTTLTKKMAEDLTDYFLELGIQV
RYLHSDVDTLRRIELLRELRSGEYDVLVGINLLREGLDLPEVSLVAILDADKQGFLRSGT
SLIQTIGRAARNVSGQVHMYADQVTPAMAQAIDETNRRREKQIAYNTERGVDPQPLRKKI
NDIVASIAREEVDTEQLLGTGYRQTKGAKTPVPTLGGKTVPGGGATAREKAKGEPVVATD
RPAAELAGIIEEMTDRMRAAAADLQFEVAARLRDEVGELKKELRQMREAGLA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctgtctctcagatcgaacgttcggtggcgcccttcgaggtcgtcagtccctac
cagcccagcggtgaccagcccgcggccatcgccgagctggaccggcgcatccgcgccggg
gagaaggacgtcgtcctgctcggcgcgaccggcaccggcaagtcggcgacgacggcctgg
atgatcgagaagctccagcgccccacgctggtgatggcgccgaacaagacgctcgccgcg
cagctggccaacgagttccgcgagctcctcccgaacaacgccgtcgagtacttcgtctcg
tactacgactactaccagcccgaggcgtacgtcccgcagtcggacacctacatcgagaag
gactcctcgatcaacgaggaggtcgagcggctgcgccactccgccacgaactccctgctc
acccggcgtgacgtggtcgtcgtcgcctccgtctcctgcatctacggcctcggcacaccg
caggagtacgtggaccgcatggtccagctcaaggtcggcgacgagatcgaccgcgaccag
ttgctgcgccgcttcgtcgagatccagtacacgcgcaacgacctggcgttcacccgcggc
accttccgggtgcgcggtgacaccatcgagatcttcccggtctacgaggagctcgcggtc
cgcatcgagatgttcggtgacgagatcgaggcgctctccacgctccacccgctcaccggt
gaggtcatcagcgaggactcctcgctccacgtcttccccgccagccactacgtcgcgggc
cccgagcgcatggagaaggcgatcggcggcatcgagcgggagctggagcagcgcctcgcc
gagctggagaagcagggcaagatgctggaggcccagcggctgcggatgcgcacgacgtac
gacatcgagatgctccggcagatcggcacctgctccggcgtcgagaactactcgatgcac
ttcgacgaccgctccccgggcaccgcgcccaacaccctcctggactacttccccgaggac
ttcctcctggtcctggacgagtcgcacgtcacggtgccgcagatcggcgcgatgtacgag
ggcgacgcctcccgcaagcggaccctggtcgaccacggcttccggctgccctccgcactg
gacaaccgcccgctgaagtgggaggagttcctgaagcggatcgaccagacggtctacctc
tccgccacccccggcaagtacgagatgtcccggggcgacggctacgtggagcagatcatc
cgccccaccgggctcgtcgaccccgaggtcgtcgtcaagcccaccgagggccagatcgac
gacctggtgcacgagatccgcaagcgcaccgagaaggacgagcgcgtcctggtcaccacc
ctcaccaagaagatggccgaggacctcaccgactacttcctggagctgggcatccaggtc
cgctacctccacagcgacgtcgacaccctgcgccgcatcgaactgctgcgggagctgcgc
tccggcgagtacgacgtcctggtcggcatcaacctgctccgggagggcctcgacctgccc
gaggtctccctggtcgccatcctcgacgccgacaagcaggggttcctgcggtccggcacc
tcgctgatccagaccatcggccgcgcggcgcgcaacgtctcgggccaggtccacatgtac
gcggaccaggtcaccccggcgatggcccaggccatcgacgagaccaaccggcgccgcgag
aagcagatcgcgtacaacaccgagcgcggggtcgacccgcagccgctccgcaagaagatc
aacgacatcgtcgcgtccatcgcccgcgaggaggtcgacaccgagcagctgctcggtacc
ggctaccgccagaccaagggtgccaagacccccgtccccacactcggcggcaagaccgtc
ccgggcggcggtgccaccgcccgcgagaaggccaagggggagcccgtggtggccaccgac
cggccggccgccgagctcgccgggatcatcgaggagatgacggaccggatgcgggcggcc
gccgccgacctgcagttcgaggtggccgcgcgactgcgcgacgaggtgggcgagctgaag
aaggaactgcgccagatgagggaagcgggactggcctga
DBGET
integrated database retrieval system
