Streptomyces sp. SirexAA-E: SACTE_4477
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Entry
SACTE_4477 CDS
T01601
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
ssx
Streptomyces sp. SirexAA-E
Brite
KEGG Orthology (KO) [BR:
ssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssx03021
]
SACTE_4477
Transcription machinery [BR:
ssx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SACTE_4477
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
HTH_24
HTH_10
HTH_3
HTH_AsnC-type
HTH_Crp_2
Sigma70_ECF
MarR
IF2_N
HTH_AraC
HTH_28
GerE
Motif
Other DBs
NCBI-ProteinID:
AEN12307
UniProt:
G2NM30
LinkDB
All DBs
Position
complement(4950786..4951757)
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AA seq
323 aa
AA seq
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MSNGNGDGPVRDETIRSEVVRPAAVPEQQARPHPVDGADAAGGVDGARGRTVAVEQSQAE
RAGQMSEHGHHDPHDRSGARALFVELRELPDGSAEKAELRNRLVRMHLPLVEHLARRFRN
RGEPLDDLTQVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRL
QELRLSLTTATAELSQQYGRSPTVHELAERLGISEEEVLEGLESANAYSTLSLDVPDTDD
ESPAVADTLGSEDEALEGVEYRESLKPLLEGLPPREKRILLLRFFGNMTQSQIAQEVGIS
QMHVSRLLARTLAQLRERLLVEE
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaacgggaacggggacgggcctgtgcgtgacgagacgatccggtccgaggtggtg
cgcccagccgccgtcccggagcaacaggcccggccgcatccggtggacggcgcggacgcg
gccggcggcgtggacggggcgcggggccgtacggtcgcggtggagcagtcgcaggcggag
cgggcgggccagatgagcgagcacgggcaccacgatccacacgaccgcagcggggcacgg
gcactcttcgtggagctgcgcgagctgcccgacggttcggccgagaaggcggagctgcgc
aaccggctggtgcggatgcacctgccgctcgtggagcacctggcccgccgcttccgcaac
cggggcgagccgctggacgacctcacccaggtcgccacgatcgggctcatcaagtcggtg
gaccggttcgacccggaccgaggcgtcgagttctcgacgtacgccacccccacggtcgtc
ggcgagatcaagcgccacttccgcgacaagggctgggcggtgcgggtgccccgccgcctc
caggagctgcggctgtcgctgaccacggccaccgcggagctctcccagcagtacggccgg
tcgccgaccgtgcacgagctggcggagcgcctgggcatctccgaggaggaggtgctggag
gggctggaatcggccaatgcctacagcacgctctccctggacgtcccggacacggacgac
gagtcgcccgcggtcgcggacaccctgggctccgaggacgaggcgctggagggcgtcgag
taccgggagtcgctcaagccgctgctggaggggctcccgccccgggagaagcgcatcctg
ctgctgcggttcttcggcaacatgacccagtcgcagatcgcccaggaggtcggtatctcc
cagatgcacgtctcccggctgctggcccgcaccctcgcccagctccgcgaacggctgctc
gtcgaggagtag
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