Sphingobium sp. SYK-6: SLG_27890
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Entry
SLG_27890 CDS
T01622
Name
(GenBank) TonB-dependent receptor-like protein
KO
K02014
iron complex outermembrane recepter protein
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_27890
Transporters [BR:
ssy02000
]
Other transporters
Pores ion channels [TC:
1
]
SLG_27890
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
BBP2
Motif
Other DBs
NCBI-ProteinID:
BAK67464
NITE:
SLG_27890
UniProt:
G2IKR2
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All DBs
Position
3007228..3009597
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AA seq
789 aa
AA seq
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MTTIFLRGCTSAFVIAAASLGASQAWAQGAAAGAPAPQEERVDAAEGDIVVTAQRRSERL
QDVPISVSVVGGERLARDNLTSLSAVADRLANVRITPGPFDQLNIRGIGSSNNTGFEQSV
ATFVDGVYRSRPRAIRAALFDVERVEVLKGPQTTFFGNNAIAGALNITTRKPGNAFEANA
SALYGTYGEYNVEAGVTAPLGEMLSVRLAGRLSGMDGFVKNEFTGKDGPRERNRVGRASI
AFTPSANFRSDLRFDTGKMSAQDFLPFELEHCPPPSPFPVGGSCANYIAANGGPVDDELN
WRNSSRPGKLDYSFNELGWTNSLSIGDYTLNAITGYFDHDTEYLQQLIPSPVPGIGGGSL
LPVFQRETFSQWSQEIRLVSPTGGFLEWQLGAYYGSSKMRNNGVTGFFFAPFGASAPPYT
AQTPVAGRLTVHEDATTKSVFGAATLRPADRVKLNLGLRYSVVSKDAFRALHNGTADPNF
PTPENYVPASKAVSDTLNAILGSNNMDFPDPSREDDKLMPSVSVQFDATPDLTAYASYTK
GFKAGGYSGGSAGGDFGPETVNAYEVGLKGNLFARQVTFSLSAFRGDYSGLQESVSETLP
SGTVRVSVANAASARSQGVEFSASWRMTSWLTASTDLAYLDAIYLNYDGAPCSSIQTLLG
ASAGCVGRRQDLSGKRRGFAPEWTGNVRLDATIPAGDMQVRISPLLYFSSWYFQSSTADD
LIRQKGYAKVDLRVGVGPQDDRWSVAVIGQNLTDRATAGFRQTVSGANGSVSALAERPRT
VAVQLTARY
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaccactatatttttgcgcggctgcaccagcgcgttcgtgatcgctgcggcgagcttg
ggcgcgagccaggcatgggcgcagggcgccgccgccggggcgcctgcgcctcaggaagag
cgcgtcgacgcggccgagggcgatatcgtcgtcacggcgcagcgccgttcggagcgtttg
caggacgtgccgatttccgtctcggtggtcggcggcgaacggctcgcccgtgacaatctg
acgagcctgtccgccgtcgccgatcgcctggccaatgtgcgcatcacgcccgggccgttc
gatcagctgaacattcgcgggatcggctcgtccaacaacaccggcttcgagcagtcggtg
gcgacgttcgtcgacggtgtctatcgctcgcgtccgcgcgccatccgcgccgccctgttc
gatgtcgagcgcgtcgaggtgctcaaggggccgcagaccaccttcttcggcaacaatgcc
atcgcgggcgcgctcaacatcaccacgcgcaagccgggcaatgccttcgaggccaatgcc
tccgcgctttacggcacctatggcgaatataatgtcgaggccggcgtgaccgcgccgctc
ggcgagatgctgagcgtgcgtctggccggccgcctttcggggatggacggcttcgtgaag
aacgagttcacgggcaaggatgggccaagggagcgcaaccgggtcggccgcgcgtcgatc
gccttcacgccgagcgccaatttccgttcggatctgcgcttcgacaccggcaagatgtcg
gcgcaggatttcctgcctttcgagctggagcattgtcccccgccctcgcccttcccggtc
ggcggcagctgcgccaactatattgcggccaatggcggccccgtcgacgacgagctgaac
tggcgcaattccagccgccccggcaagctggactattccttcaacgagctgggctggacc
aactcgctcagcatcggcgactatacgctgaacgccatcaccggctatttcgatcatgac
acggaatatctgcagcagctcatcccctcgcccgttcccgggatcggcgggggcagcctg
ctgccggtcttccagcgcgagacgttcagccaatggtcgcaggaaattcgcctcgtctct
cccacgggtggcttcctcgagtggcagctgggcgcctattatggcagcagcaagatgcgc
aacaatggcgtgacgggcttcttcttcgcgcccttcggtgcctccgcgccgccgtatacg
gcccagactcccgttgccgggcgcctgacggtgcatgaggatgccaccacgaaatcggtg
ttcggtgccgccacgctgcggccggcggaccgggtcaagctcaacctcggcctgcgctac
tcggtggtctcgaaggacgctttccgcgccctgcacaacggcacggcggacccgaacttc
ccgacgccggaaaactatgtgccggccagcaaggccgtcagcgatacgctgaacgccatc
ctgggctcgaacaacatggatttcccggatccctcgcgcgaggatgacaagctcatgccg
tccgtgagcgtgcagttcgatgcgacgccggacctcacggcttatgcgagctataccaag
ggcttcaaggccggcggctacagcggcggctcggccggcggggacttcggcccggaaaca
gtcaatgcctatgaagtcggcctgaagggcaatctcttcgcccggcaggtcacattctcg
ctgagcgcattccggggcgattattcgggccttcaggaatccgtgtcggaaaccctgccc
agcggcacggtgcgcgtcagtgtcgccaatgccgcatccgcccgctcgcaaggcgtggaa
ttctcggcgagctggcgcatgaccagctggctgaccgccagcaccgacctcgcttatctg
gacgcgatctatctcaactatgatggcgcgccctgttcgtcgatccagaccctgctcggc
gcctcggccggctgcgttggccggcggcaggacctctccggcaagcggcgcggcttcgcg
cccgaatggaccggcaatgtccgcctcgatgcgaccatcccggccggggacatgcaggtg
cggatttcgccgctcctctacttcagctcctggtatttccagtcctccacggcggatgac
ctgatccggcagaagggctacgcgaaagtcgatctgcgcgtcggggtcgggccgcaggat
gatcgctggagcgtggcggtgatcggccagaacctgaccgaccgcgccactgccgggttc
cgccagacggtgagcggcgccaatggttcggtctcggcgctcgccgagcgcccgcgcacg
gtcgcggtccagctgaccgcgcgttactga
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