Streptococcus pseudopneumoniae: SPPN_06230
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Entry
SPPN_06230 CDS
T01590
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
std
Streptococcus pseudopneumoniae
Brite
KEGG Orthology (KO) [BR:
std00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
std03032
]
SPPN_06230
03400 DNA repair and recombination proteins [BR:
std03400
]
SPPN_06230
Enzymes [BR:
std01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SPPN_06230
DNA replication proteins [BR:
std03032
]
Prokaryotic type
DNA Topoisomerases
SPPN_06230
DNA repair and recombination proteins [BR:
std03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SPPN_06230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
RNA_POL_M_15KD
DUF2996
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AEL10682
LinkDB
All DBs
Position
complement(1188759..1190846)
Genome browser
AA seq
695 aa
AA seq
DB search
MATATKKKKSTVKKNLVIVESPAKAKTIEKYLGRNYKVLASVGHIRDLKKSSMSVDIENN
YEPQYINIRGKGPLINDLKKEAKKANKVFLASDPDREGEAISWHLAHILNLDENDANRVV
FNEITKDAVKNAFKEPRKIDMDLVDAQQARRVLDRLVGYSISPILWKKVKKGLSAGRVQS
IALKLIIDRENEINAFQPEEYWTIDAIFKKGTKQFQASFYGVDGKKLKLTSNDEVKEVLS
RLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVAQQLYEGINIGS
GVQGLITYMRTDSTRISPVAQNEAASFITDRFGSKYSKHGSKVKNASGAQDAHEAIRPSS
VFNTPESIAKYLDKDQLKLYTLIWNRFVASQMTAAVFDTMAVKLSQNGVQFAANGSQVKF
DGYLAIYNDSDKNKMLPDMAVGDVVKQVNSKPEQHFTQPPARYSEATLIKTLEENGVGRP
STYAPTIETIQKRYYVRLAAKRFEPTELGEIVNKLIVEYFPDIVNVTFTAEMEGKLDDVE
VGKEQWQRVIDAFYKPFSKEVAKAEEEMEKIQIKDEAAGFDCEVCGSPMVIKLGRFGKFY
ACSNFPDCRHTQAIVKEIGVECPSCHQGQIIERKTKRNRLFYGCNRYPECEFTSWDKPVG
RDCPKCGNFLMEKKVRGGGKQIVCSKGDYEEEKIK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtggctacggcaacaaaaaagaaaaaatcaacagttaaaaaaaatctagtaatcgtggag
tcacctgctaaggccaagacgattgaaaaatacctaggcagaaactacaaggttttagcc
agtgtcgggcatatccgtgatttgaagaaatccagtatgtcagtcgatattgaaaataat
tacgaaccacaatatatcaatatccgaggaaaaggtcctcttatcaatgacttgaaaaaa
gaagccaaaaaagctaataaagtctttctcgcaagtgacccggaccgtgaaggagaagcg
atttcttggcatttggcccacattctcaacttggatgaaaatgatgccaaccgtgtggtc
ttcaatgaaatcaccaaggatgcggtcaaaaatgcttttaaagaacctcgcaagattgat
atggacttggtcgatgctcaacaggcacgccgtgttttggaccgcttggtaggctattcg
atttcgcctattttgtggaaaaaggtcaagaagggcttgtcagcaggtcgcgtacagtcc
attgcccttaaactcatcattgaccgtgaaaatgaaatcaatgcttttcagccagaagaa
tactggacaattgatgctatctttaaaaagggaaccaagcaatttcaggcttccttctat
ggagtggatggtaaaaagctgaaactgactagcaatgatgaggttaaggaagtcttgtct
cgtctgaccagtaaagatttttcagtagatcaggtggataagaaagagcgcaagcgaaat
gctcctttaccttataccacttcatcaatgcagatggatgctgccaataaaatcaatttc
cgtactcgaaagaccatgatggttgctcaacagctctatgaagggatcaatatcggttct
ggtgttcaaggtttgattacctatatgcgtaccgattcgacccgtatcagtcctgtagcg
caaaatgaagcagcaagtttcattacggaccgttttggtagcaagtattctaagcatggt
agcaaggtcaaaaatgcatcaggtgctcaggatgcccacgaggctattcgcccgtctagt
gtctttaacacaccggaaagtattgctaagtatctggataaggatcagctcaagctttat
actcttatttggaatcgttttgtagcgagtcagatgacagctgctgtctttgatactatg
gccgttaaattgtctcaaaatggagttcaatttgctgccaatggtagtcaggttaagttt
gatggttatcttgccatttataatgattctgataagaataagatgttaccagatatggct
gttggagatgtggtcaaacaggtcaatagcaaaccagagcaacatttcacccaaccgcct
gctcgttattctgaagcgacactgatcaagaccttggaggaaaatggtgttggtcgtccg
tcaacctacgcaccaaccattgaaaccattcagaaacgttattatgttcgccttgcagcc
aaacgatttgaaccaacagagttgggagaaattgttaacaagctcatcgttgaatatttc
ccagatatcgtaaacgtgacctttacagctgaaatggaaggcaagctggatgacgtcgaa
gttggaaaagagcagtggcaacgtgtcattgatgccttttacaaaccattttctaaagaa
gtcgccaaggctgaagaagaaatggaaaaaatccagattaaggatgaagcagctggattt
gactgtgaagtgtgtggcagtccaatggttattaaacttggtcgttttggtaagttctac
gcttgtagcaatttcccagattgccgccatacccaagcaatcgtgaaagaaatcggcgta
gagtgtccaagttgtcatcagggacaaatcattgaacgtaaaaccaaacgtaatcgtctc
ttctatggttgcaatcgctatccagaatgtgaatttacctcttgggataagcctgttggt
cgtgactgtccaaaatgtggcaacttcctcatggagaaaaaagtccgtggtggtggcaag
cagattgtttgtagcaagggtgactacgaagaagaaaagattaaataa
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