Streptococcus thermophilus LMD-9: STER_1280
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Entry
STER_1280 CDS
T00414
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
ste
Streptococcus thermophilus LMD-9
Pathway
ste03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STER_1280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ste03400
]
STER_1280
DNA repair and recombination proteins [BR:
ste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STER_1280
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
GIY-YIG
HHH_5
HHH_2
5_3_exonuc
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
ABJ66462
UniProt:
Q03K10
LinkDB
All DBs
Position
complement(1190015..1191802)
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AA seq
595 aa
AA seq
DB search
MNGLIKHKLELLPSNPGCYLHKDKFGNIIYVGKAKNLKNRVRSYFRGSHDTKTELLVSEI
ADFEFIVTESNIEALLLEINLIQENMPKFNIRLKDGKSYPFIKITKELYPRLLITRQVKK
DGGLYFGPYPDSGAANEIKKLLDRIFPFKKCKNPANKVCFYYHIGQCNAHTICHTTEDYW
QGLVEDVKNFLNGHDDKIVNQLKAKMKDMSDQMAFERAAEYRDLIEAVSTLRTKQRVIRQ
DMQDRDIFGYYVDKGWMCVQVFFVRQGKLIQRDVNMFPYYNDAEEDFLTYMGQFYLDSRH
LKPKEIFIPGDIDQESVEALVGDEVKVFKPKRGEKKQLVNLATKNARVSLTQKFDLLEKD
IAKTQGAIENLGKLMGIPTPVRIESFDNSNIMGTSPVSAMVVFENGKPNKKEYRKYKIKT
VEGPDDYASMREVIRRRYSRVKRDGLTPPDLIIMDGGQGQVNVAKDVLRNELNLSIPVAG
LQKNDKHQTNELLFGDPLRVIDLPRQSEEFFLLHRIQDEVHRFAITFHRQVRSKNSFSSK
LDGVEGLGPKRKQKLLKNFKSMTAIQQASVEDIQALGIPKKVAQALLDKLSQDSH
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtctgattaaacataagttggaactgctcccaagcaacccagggtgttatctc
cacaaggacaaattcggcaatattatttatgtcggtaaggctaaaaatctaaaaaatcgt
gtgcgtagctattttcgtggaagccatgataccaagacggagcttttggtatctgagatt
gcagactttgaatttatcgtaaccgagtctaatatcgaggccctgcttttggaaattaac
ctcattcaagagaatatgcccaaatttaacattcgcctcaaggatggcaagtcttatcca
tttatcaagattactaaggaactctatccaaggctcttgattacccgccaggttaagaag
gatggtggtctctattttggtccttacccagactctggtgcagccaatgaaatcaagaag
ctgttggaccgtattttcccctttaagaaatgtaaaaatcctgctaacaaggtctgtttc
tattaccatattggccaatgtaatgcccacaccatctgtcacaccactgaggactattgg
caaggtttggttgaggatgtcaagaattttctaaacggtcatgatgataaaatcgttaac
cagcttaaggccaagatgaaggacatgtctgatcagatggcgtttgagcgggcagcagaa
tatcgagatctgattgaggcagtgtcgacgctcaggaccaaacaaagggttatccgtcaa
gatatgcaggaccgcgatatttttggctactacgtggacaagggctggatgtgtgttcaa
gttttctttgttcgccaaggaaaactcatccagcgtgatgtcaatatgttcccttactat
aatgatgctgaggaagattttctaacctatatgggtcaattttacttggatagccgtcat
ctcaagcctaaggagattttcattccaggggacattgatcaagagtctgtcgaagctctg
gtcggagatgaagtcaaggtttttaaaccgaaaagaggcgagaaaaagcagttggttaat
ctggcaacgaaaaatgcccgtgtcagcctgactcaaaaatttgatcttcttgaaaaagat
atagccaagacccaaggagccattgaaaatctaggcaaactcatgggaattccgacaccg
gttcgcatcgagtccttcgataactctaacatcatgggaacgagccctgtatctgccatg
gtcgtttttgagaacggcaaacctaataaaaaagagtaccgcaaatacaagattaagacg
gttgaaggtcctgacgattatgccagcatgcgtgaggtcattcgtcgccgttatagtcgt
gtcaaacgtgatggtctaaccccaccagacctcattatcatggatggtggtcaaggtcag
gtcaatgtcgctaaggacgtgcttcgtaatgagctgaatctatctatcccggttgcaggt
cttcagaaaaatgacaagcaccaaaccaatgaattgctctttggagatcctttgcgagtc
attgatttgccacgtcaatccgaggagtttttcctccttcaccgtattcaggatgaagta
caccgctttgccatcaccttccatcgacaagtccgtagtaagaatagtttcagttccaaa
cttgatggcgtggaggggttgggacctaaacgcaaacaaaaactcctcaaaaacttcaaa
tcaatgacagctatccaacaagccagtgtcgaagacatccaagctcttggaattcctaaa
aaagtagctcaagctttattagataagttgagccaagatagtcattaa
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