Stenotrophomonas sp. WZN-1: CCR98_20160
Help
Entry
CCR98_20160 CDS
T04963
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
sten
Stenotrophomonas sp. WZN-1
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sten03009
]
CCR98_20160
Enzymes [BR:
sten01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
CCR98_20160
Ribosome biogenesis [BR:
sten03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CCR98_20160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
ARZ76377
UniProt:
A0A1Z2LPT9
LinkDB
All DBs
Position
complement(4321019..4321558)
Genome browser
AA seq
179 aa
AA seq
DB search
MLIAFNKPFNVLCQFTDRSVPPRPTLAGFGLPPRVYAAGRLDHDSEGLLLLTDNGTLAHK
LTDPKHKADKTYWVQVEGMPSDEQLQQLRDGVVLNDGPTLPAKIERIDPAPSLWTRDPPV
RFRKTVPDAWLAITIREGRNRQVRRMTAAVNLPTLRLVRVSMGPYRLDDLQPGQWRQIG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgccttcaacaagcccttcaacgtgctctgccagttcaccgaccgcagcgtg
ccgccgcggccgaccctggccgggttcggcctgccgccgcgcgtgtatgccgccggccgc
ctggaccatgacagcgagggcctgctgctgctgaccgacaacggcacgctggcgcacaag
ctgaccgacccgaagcacaaggctgacaagacctactgggtgcaggtggaaggcatgccc
agcgacgaacagctgcagcagctgcgcgacggcgtggtgctcaatgatggaccgaccctg
ccggccaagatcgaacgcatcgatccggcgccgtcgctgtggacgcgcgatccgccggta
cgtttccgcaagaccgtgcccgatgcgtggctggcgatcacgatccgcgagggccgcaac
cgccaggtgcggcggatgaccgcggcggtgaacctgccgacgctgcggctggtgcgggtg
tcgatgggaccgtaccggctcgatgacctgcagcctgggcagtggcggcagatcggttga
DBGET
integrated database retrieval system
