Streptococcus salivarius 57.I: Ssal_02107
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Entry
Ssal_02107 CDS
T02088
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
stf
Streptococcus salivarius 57.I
Pathway
stf03030
DNA replication
stf03430
Mismatch repair
stf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ssal_02107 (polC)
03430 Mismatch repair
Ssal_02107 (polC)
03440 Homologous recombination
Ssal_02107 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stf03032
]
Ssal_02107 (polC)
03400 DNA repair and recombination proteins [BR:
stf03400
]
Ssal_02107 (polC)
Enzymes [BR:
stf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ssal_02107 (polC)
DNA replication proteins [BR:
stf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ssal_02107 (polC)
DNA repair and recombination proteins [BR:
stf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ssal_02107 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
HHH_3
Rv2179c-like
DNA_pol_A_exo1
DEDDh_C
B
DnaA_N
YhfH
Motif
Other DBs
NCBI-ProteinID:
AEJ54318
LinkDB
All DBs
Position
complement(2066953..2071347)
Genome browser
AA seq
1464 aa
AA seq
DB search
MSDKFQLLLKQIRFPEDHDAFKEIKDGSIETVKLFKSKRQWFFVFSFPSVLSYESFALFD
SLLHSSFNSLGAKASFEIRLVSTACDDSLLGDYFSYALDSLKVSHFSTYSLFSNLKVEIS
NNSIFVKAPEHIIKENVQDRFISLISKSLSQVGLSDVSISVVEDKEASSSLEEAYQTNKV
SLQEQAESQARQALQSILESAPAPKPVTEPSQNFAEKQSQRQASFDKAEITPMVDINSEE
NRVVFEGYIFDVEQRETKTGRIIINFKVTDYTSSFAMQRWVKDSDELAKFDMIKKGNWVR
VRGRIENNPFTHSLTMNVQDIKEISHTPRKDLMPEGQKRVEFHAHTNMSTMDAMPTVEDL
IDTAASWGHPAVAITDHANVQSFPHGYHRAKKAGIKAIFGLEANLVEDKVPIVYNSEDLE
LKEATYVVFDVETTGLSAVHNDLIQIAASKMHKGNIIEQFDEFIDPGHPLSAFTTELTGI
TDNHVKGAKPLVQVLQEFQEFCQGTVLVAHNATFDVGFMNANYERHQLPTISQPVIDTLE
FARNLYPEYKRHGLGPLTKRFGVALDHHHMANYDAEATGRLLFIFIKDVFDKHGLTNLEQ
LNTDLVSEDSYKKSRVKHATLYVQNQTGLKNIFKLVSLSNVSYFEGVARIPRTVLDEYRE
GIIVGSACADGEVFDTLLSHGIDKAVEVAKYYDFIEVMPPAIYAPLIAKDLIKDEEAIEQ
LIRDLIEVANRLDKPVLATGNVHYINPEDAIYREIIVRALGQGAMINRPIGKGENAKPAP
LPEAHFRTTNEMLDDFAFLGKDLAYEIVVTNTQAMADQIEEVEVVKKDLYTPFIDRAEEQ
VAEMTYARAFELYGNPLPDIIDLRIEKELSSILGNGFAVIYLASQMLVNRSNERGYLVGS
RGSVGSSFVATMIGITEVNPMPPHYLCPNCQHSEFITDGSYGSGFDLPDKECSECGTEYK
KDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRDIFGEQYAFRAGTVGTVADRT
AYGFVKGYERDYNKFYRDAEVDRLAMGAAGVKRNTGQHPGGIVVIPNYMDVYDFTPVQYP
ADDVTAAWQTTHFNFHDIDENVLKLDILGHDDPTMIRKLQDLSGIDPKDIRADDPDVMKL
FSGTDILGVTPEQIGTPTGMLGIPEFGTNFVRGMVDETHPTTFAELLQLSGLSHGTDVWL
GNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLDPKMAFTIMERVRKGMWLKISEEERNG
YIQAMRENNVPDWYIESCGKIKYMFPKAHAAAYVMMALRVAYFKVHHPIYYYCAYFSIRA
KAFELKTMSAGLDAVKARMEDIKEKRQRNEATNVENDLFTTLEIVNEMLERGFTFGQLDL
YKSQATEFLIEGDTLIPPFIALEGLGENVAKQVVAAREEGEFLSKTELRKRGGLSSTLVE
KLDEMGILGNMPEDNQLSLFDDFF
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaatttcagcttctcttaaaacaaattcgttttcctgaggatcacgatgct
tttaaagaaattaaagatggttctattgaaacagtaaagctatttaaatcaaaacgccaa
tggttctttgttttttcttttcctagtgttctgtcttatgagtcttttgctctttttgat
agtttacttcactcttcttttaattctttaggtgctaaagcttcttttgagattcgttta
gtttctactgcttgcgatgattctttacttggagattatttttcatatgctttagatagt
ttaaaagtgtcacacttttctacttattctttattctcaaatctaaaggttgagatttcg
aataatagtatttttgttaaagctccagagcatattataaaggaaaatgtacaggataga
tttatttctttgatatctaaatctctttctcaagttggtttatctgatgtatccatttct
gttgtcgaagataaggaagcttcatcttctttagaagaggcttaccaaacaaataaggtt
tctttacaagaacaagccgagtctcaagcaagacaagcgcttcaatctattcttgaaagt
gccccagcaccgaaacctgtgaccgaaccatcacaaaattttgctgagaaacaaagtcaa
cgtcaagctagttttgataaggctgaaataacgccaatggttgatattaattctgaagag
aatcgtgttgtttttgaaggatatatttttgatgtagagcaacgtgaaactaagacgggt
cgaattattattaattttaaggtaactgattatacctctagttttgctatgcaacgatgg
gtcaaagatagtgatgagctcgctaagttcgatatgataaaaaaggggaactgggttagg
gttcgtggccgtatcgagaataatcctttcactcatagtctgactatgaatgtgcaagac
attaaagaaatttcacatactcctcgtaaggatttgatgcctgagggacaaaagcgtgtg
gaatttcatgcgcataccaacatgtcgactatggatgcaatgccaactgttgaagatctt
attgatactgctgcctcttgggggcacccagcagttgctataacagatcatgctaatgtt
cagagttttcctcatggctaccatagggctaaaaaagctgggattaaggctatttttggt
cttgaagccaatcttgttgaggataaggtacctattgtttataattctgaagatttggaa
ttaaaagaagcaacttatgttgtatttgacgttgagacaacgggcttgtctgctgttcat
aatgatttgattcagattgcggcatcaaaaatgcataaaggtaatattattgagcaattt
gatgaattcatagatccaggacatcctctttctgcatttactactgagttgaccggtatt
actgataatcatgttaaaggtgctaaacctttagtgcaagttttacaggaatttcaagaa
ttctgtcaaggaactgtgctagtggcccataatgcgacctttgacgttggttttatgaat
gccaattacgaaagacatcagttaccaacaatttcacaaccggttattgatactttagaa
tttgcacgaaatctttatcctgagtataagcgtcatggtttggggcctttgacgaagcgg
tttggtgtggctttggatcatcaccatatggccaattatgatgcggaagctacgggtcgt
ttgttgtttatcttcataaaagatgtgtttgataagcacggtttgactaatctggaacag
ttgaacacggatttggtttctgaagattcgtataaaaagtctcgtgtcaaacatgcgacg
ctgtatgttcagaatcaaactggcttgaagaatatctttaagttagtaagtttatcaaat
gtctcatactttgagggagtagcacgtattcctcgtacggtcttagatgagtatcgtgag
ggaattattgtaggttctgcttgtgctgatggtgaggtttttgatacgcttctgtctcac
ggtattgacaaggcggttgaagttgctaaatattatgactttattgaagttatgccaccg
gcaatttatgcacccttgattgcaaaggatttaatcaaggatgaggaggctatagaacaa
ctgattcgggatttgattgaagtcgctaatcgtctggacaagcctgtgctggctacagga
aatgtacactatatcaaccctgaggatgccatttatcgtgaaatcattgttcgtgctttg
ggacaaggagccatgattaataggccaattggtaagggagaaaatgcgaaacctgctcct
ttacctgaagcgcattttaggacaactaacgagatgctagacgactttgcctttttagga
aaagacttagcctatgaaattgttgtaactaatacgcaggctatggcagatcaaattgaa
gaggttgaggttgtcaaaaaagacttgtacacaccttttattgatcgtgcggaagaacag
gttgcggagatgacatatgctagagcgtttgagctctatggtaatcctttgcctgatatt
attgacctgcgaattgagaaagagttgtcttcaattcttggtaatggatttgccgtaatc
tacctggcttcgcagatgctagttaaccgttcaaatgaacgtggctacctagttggttcg
cgtggatctgtcggttctagttttgttgcgacgatgattggaattactgaggtcaatccg
atgccgccacattatctctgtcctaattgtcaacactcagagttcattacagatggatct
tatggatctggcttcgatttgcctgataaggaatgttcagaatgtggaacggaatataaa
aaagatggtcaggatattcctttcgagaccttcctaggttttgatggggataaggttcct
gatatcgatttgaacttctccggtgatgatcaaccatcagcccacttggacgttcgtgat
atttttggagagcaatatgcttttcgtgccggaacagtaggaactgttgcagatcggacg
gcttatggttttgttaaaggttacgaacgtgattacaataagttttaccgtgatgccgag
gtcgatcgtttagccatgggggctgcgggtgttaagcgaaacacaggtcagcacccgggt
ggtattgttgttattccaaattatatggatgtctatgatttcacacctgttcaatacccg
gcagatgatgtaacggctgcctggcagacgactcactttaacttccacgatattgatgag
aacgtgttgaagcttgatattctgggacatgatgatccgactatgattcgtaagttgcag
gatttatcaggaattgatccaaaagatattcgagcagatgatccagatgtaatgaaactt
ttttcagggactgatattttaggggtaacacctgaacagattgggacaccaacgggaatg
ttgggaatccctgagtttgggactaactttgttcgtggtatggtcgacgagacgcatccg
acgacctttgcggaactcttacagttatctggtttgtctcatggaacagacgtttggcta
ggtaatgcacaagatttgattaaggaaggtatcgccactctgaaaacagttatcggttgt
cgtgatgatatcatggtatacctaatgcatgcggggttagatcctaagatggccttcact
attatggaacgtgtgcgtaaggggatgtggttgaagatttccgaagaagagcgtaatggc
tatattcaagccatgcgtgaaaataatgttccagactggtacattgaatcttgtggtaaa
attaagtacatgttccctaaagcccatgcggcagcctacgttatgatggccttgcgtgta
gcttatttcaaagtgcaccatcctatttattactattgtgcctacttctcaattcgagct
aaagcatttgagcttaagacgatgtctgcaggtcttgatgctgttaaagctcgaatggaa
gatattaaggagaagcgccaacgaaatgaagcgactaatgttgaaaatgacttatttacg
acgcttgaaattgtcaatgaaatgttagaacgtggctttacctttggtcagttagatctt
tataagagtcaggcaactgaatttctgattgaaggagatactttgattccaccgtttatt
gcacttgaaggtttgggtgagaacgttgctaagcaagtggttgctgcgcgtgaagaaggt
gaattcctttccaagacagaattgcgtaaacgaggaggcctatcatcaaccttggttgaa
aaattggatgaaatgggcatcctaggaaatatgccagaagataatcaattaagtcttttt
gatgatttcttttaa
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integrated database retrieval system
