Salinispora tropica: Strop_1887
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Entry
Strop_1887 CDS
T00504
Name
(GenBank) phenylalanyl-tRNA synthetase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
stp
Salinispora tropica
Pathway
stp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Strop_1887
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
stp01007
]
Strop_1887
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stp03016
]
Strop_1887
Enzymes [BR:
stp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Strop_1887
Amino acid related enzymes [BR:
stp01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Strop_1887
Transfer RNA biogenesis [BR:
stp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Strop_1887
Prokaryotic type
Strop_1887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
B3_4
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
ABP54349
UniProt:
A4X649
LinkDB
All DBs
Position
2153196..2155781
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AA seq
861 aa
AA seq
DB search
MRVSVSWLREYVDLPAHLTPADLEQSLVGLGLEVESIVDLAGTVTGPLVVGEVREIEELT
GFKKPIRFCRVDVGDANGTGELQEIVCGARNFAVGDRVVVILPGGVLPGNFAIGARRTYG
RNSRGMICSAKELGLGDDHAGIIVLPGSSPAKPGDDARPVVGLDDVVVEVELTPDRGYQM
SVRGIARELSHAFGVPFRDPGLASAPAGTEAPAYPVEVRDPVGCDRFAARMVRGVNPAAP
SPAWMVQRLTTAGIRSLSLPVDITNYVMLELGQPMHAFDADRITGSLVVRRAVAGEQLTT
LDGVVRTLVAEDMVISDAGLPNPNPAAGADAGAPISLAAVMGGESSEVVAETSNVLFEAA
HWDPVMVGRTARRHRLFSAAAKRWERGVDPALPLVAIDRAVRLLVEHGGGATGAEILDID
HRTSPVPVVMPADLPSRRVGVAYPADRVAALLTEIGCTVAAGPDQLTADPGEVGVAAGGA
VSFVVTPPTWRPDLTDPADLVEEVVRLDGYDRVPAVLPVAPAGRGLTWQQRRRRAVARML
ADRGYVEVLCSPFVAVELADQLGLPAGDARRRAVRLANPLSEEEPALRTTLLGPLLGVLR
RNLGRGQRDLALYEIGTVFHPRTEAGTPPRMGVEHRPSDAELAAADAVLPEQPQHVAVVL
AGEVEPGGWWGEGRPAGWADAVEAARTVLAAAGIPEDRVTVRAVEHAPWHPGRCAQLVVD
GVTVGYAGELHPAVIAGLELPRRTAAMELDLDAVPAAPVRQAPVISSFPPALIDVALVVD
VDVPVAQVQGALVEGAGELLESVRLFDVYAGEQLGAGRRSLAYKLTFRAPDRTLTVEEAV
AARDAAVAAVAERFGATLRGV
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtttctgtcagttggctgcgtgagtacgttgacctgccggcgcatctgaccccg
gccgacctcgagcagtccctggtcggtcttggtctcgaggtggagtccatcgtggacctg
gccggtacggtcaccgggccgctggtcgtcggcgaggtgcgggagattgaggagctgacc
ggcttcaagaagccgattcgcttctgtcgggtggacgtgggtgacgccaacggcaccggc
gagttgcaggagatcgtctgcggggcgcgcaacttcgcggtcggtgaccgggtggtggtg
atcctccccggcggggtgctgcccggtaacttcgcgatcggggcgcgccggacgtacggg
cgtaactccaggggcatgatctgctcggcgaaggaactgggcctgggcgacgaccatgcc
ggcatcattgtgctgccgggctccagccccgccaagccgggcgacgacgcccgccccgtg
gttggcctcgacgacgtggtggtcgaggtggagctgaccccggaccggggttaccagatg
tcggtgcgggggatcgcccgggagctgtcgcacgcgttcggggtgccgtttcgggatccg
gggctcgcgtccgccccggccgggaccgaagcgcccgcgtacccggtggaggtgcgggat
cccgtcggctgtgaccggttcgcggcgcggatggtacgtggcgtcaacccggccgcgccg
tcgccggcctggatggtccaacggctcaccaccgccggcattcgcagcctctcgctgccg
gtcgatatcaccaactacgtgatgctcgagctgggccagccgatgcacgccttcgacgcg
gaccggatcaccggctcgctggtggtccgccgggccgtggcgggggagcagttgaccacc
ctggacggggtggtgcgcacgctcgtcgccgaggacatggtgatctctgatgcggggctg
ccgaatccgaacccggctgcgggcgcggacgccggtgccccgatttcgctcgctgccgtc
atgggtggggagagcagcgaggtggtcgcggagaccagcaacgtgttgttcgaggcggcc
cactgggatccggtgatggtggggcgcaccgcccgccggcaccggctgttcagcgcggca
gccaagcggtgggagcggggcgtcgacccagccctgccgttggttgccatcgaccgggcg
gtgcggctgctggtggagcatggcggcggcgcgaccggtgcggagatcctcgatatcgat
catcgaacgtcgccggtaccggtggtcatgccggcggacctgccgtctcgacgggtcggg
gtggcctacccggcggaccgggtggctgccctgctcaccgagatcggctgcacggttgcc
gccggcccggatcagctcaccgcggatccgggtgaggtgggtgtcgccgctggtggcgcg
gtctcgttcgtggttaccccgccgacctggcgacccgacctgaccgacccggccgacctg
gtcgaggaggtggtccgtctcgacggctacgaccgggtgccggcggtgctgccggtggcc
cccgccggccggggcttgacctggcagcagcggcgccggcgggcggtggccaggatgctc
gccgaccgggggtacgtggaggtgctctgctcgccgttcgtggcggtcgagctggccgac
cagctgggcctgccggccggcgatgcgcggcggcgggcggtgcggctggccaacccgctg
tcggaggaggagccggcgctgcggacgacgctgcttggtccgctgctcggtgtgctccgg
cggaacctgggccggggccagcgggacctcgcgctgtacgagatcgggacggtcttccac
ccgcggaccgaggccggcactccgccgcggatgggggtggagcaccggccgtcggacgcg
gagctcgccgccgccgatgcggtgctgccggagcagccccagcacgtcgccgtggtgctc
gccggtgaggtcgagccgggtggctggtggggcgaggggcgcccggccggctgggcggac
gcggtcgaggcggcccggacggtgctcgccgccgccggtattcccgaggaccgggtgacc
gtgcgggccgtggagcacgccccctggcaccccgggcgctgtgcgcagctggtggtggac
ggcgtgactgtcgggtacgcgggggagctgcatccggcggtgatcgccgggttggagttg
ccccgccgtaccgcggcgatggagctggacctggacgcggtcccggcggccccggtgcgg
caggccccggtgatctcgtccttcccgcccgccctgatcgatgtggcgctggtggtcgat
gtcgacgtgccggtcgcccaggtgcagggggcgctggtggagggggccggcgagctgttg
gagtcggtccggctcttcgacgtgtacgccggtgagcagctcggcgcgggtcgtcggtcg
ttggcgtacaagctgaccttccgtgcgccggatcggacgctgacggtggaggaggcggtc
gcggcgcgggacgcggcggttgccgctgtcgcggagcgtttcggcgcaaccctccggggc
gtgtga
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