Spirochaeta thermophila DSM 6578: Spith_1037
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Entry
Spith_1037 CDS
T02016
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
stq
Spirochaeta thermophila DSM 6578
Pathway
stq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Spith_1037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stq03021
]
Spith_1037
Transcription machinery [BR:
stq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Spith_1037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
TetR_C_24
HTH_Crp_2
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
AEJ61309
UniProt:
G0GD17
LinkDB
All DBs
Position
1167424..1168440
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AA seq
338 aa
AA seq
DB search
MEHKQHIHSMSHEQQQVNHPAKRRSTRDVSAREDELSDADALALYLKQISSYPLLTPEEE
HWIGGEIQRIKLRLRELSSLPEEQRAHHFEEERRLDQRLRELKNRMITANLRLVVSIAKK
YQHRGLSLLDLIDEGNIGLIEAVERFDYTKGCRFSTYGTWWIRQAIVKSLADKSRVIRIP
IHMLNTIKNVFMLSKELAQELGRDPTEEELSRYTGLPDRRVAEIMQVSQETASLDITVDE
ENMTTLGDLVSDDEDQGPFEKVFHRYLRDVLLEALSDLSERERNVISLRFGLNGEGPLTL
EETGKLLGITRERVRQIQEKALAKLREMGFIRDFRHYT
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggaacacaaacaacacatccattccatgtcccatgaacagcagcaggtgaaccaccca
gcgaagagaagaagcacgagagatgtgtcagcacgggaggatgaactctccgatgcggat
gccctcgcgctctacctcaaacagatctcctcgtatcctctcctcactccggaggaagag
cactggatcgggggggaaatacagaggataaaactccgattgcgggagctctcctcgctc
cccgaggagcaacgggctcatcatttcgaggaggaacgacggctcgatcaacgcctccgt
gaactcaagaacagaatgataacggccaacctgcgtctcgtggtgtccattgcgaagaaa
taccagcacagaggcctttcccttctcgatctcatagatgaagggaacatagggctcatc
gaggccgtggaacggttcgactataccaagggatgccggttctccacctacggtacatgg
tggattcggcaggccatcgtgaagtcgctcgccgacaagagccgcgtgatccgcattccc
atccacatgctcaacaccataaagaacgtgttcatgctctccaaggagcttgcccaggaa
ctgggacgtgatcccacggaagaggagctctcccgatacaccgggcttccggacaggcgg
gtggcggaaatcatgcaggtctcacaggaaacggcctccctggatatcacggtcgatgaa
gagaacatgaccacactgggggacctcgtttccgacgacgaggatcagggccccttcgaa
aaggtcttccatcggtacctccgtgacgtcctcctcgaggcgctcagcgatctcagtgag
cgcgagagaaacgtcatctcccttcgtttcgggctcaacggtgaaggaccgctcaccctg
gaagagaccgggaagttgctcgggatcacgagggaacgggtgaggcagatccaggagaag
gccctggccaagctgagggagatgggattcatcagagattttcgtcattatacctga
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