Sebaldella termitidis: Sterm_1729
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Entry
Sterm_1729 CDS
T01123
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
str
Sebaldella termitidis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
ACZ08587
UniProt:
D1AIK3
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All DBs
Position
1849912..1856625
Genome browser
AA seq
2237 aa
AA seq
DB search
MKNKNFLMFFLAVNAFAVSQGAAESIKRPEKYEKLYNGMVQNIEAGKSNVKNYEVLEKIL
EKRNKELKDLYEQSDYIVKPEYLEWQIFFSGFYSHRESGDNTLANGTYHSDPSNVNGKFY
TALGEAKQVDLGLYIPERTIKRSPVELKLVSPPEINLSSLDVNPEVNPSVSPDAASGTYK
EYTPVGSMKSFLEAYENVFKSETNSQLKDDGVTELINSGDPSSSYKINYNVNTGLNITYD
TVTDSFSENKLFTNGDSLVTWGTNSITTSYGNTANDPAFYGGGTRVAGVYGGTGNSITNS
NQMDLKGPFTYGMVAEGGNSNTLINNSTGIISDDKENDITDTWYNNEIPHIGETITYTQE
KTTSDPNIVINDPYRTTTVSKHPDGNIIYVNGRPVYRHGGTATNPDVSSTVTTIDSIDYT
RTTSVTSYTGGYLGYKVGMFVNSNLNPINTIIQNDGKIKFNGYSSIGMYTSAGVRLSDVQ
MLNTATIDINTGNYTGYSNFGMKLDGVVNNDQTKKIISNTGTISISNGAGIAVVNGSVGE
GFVENSGTITVTNGTGVYLAPVSTSARLEDAVNTASGIIDVTSGAGMYALGGRDEITRVI
NNGEISVLGGMGMVASGKNAEAVNTSNDFKIKTSTGGFYAHNGGKVINSADLTVNSSGVS
LFNIDVNSEGSSVGNIIMDGTNSVAVYNKGKFTSTGDIDIAKSGSIAVYSTGTDNTNIKA
DTIKLDGAKGAAFYTDGGKINISPNTGTTTAVTVSGDSSYLFYDSSFKTGAVPNQTFVID
GNFTANVKDGAIAFDFKNNSGNLIDYVKNSLLNIKSGTTTINIEGTAFHAKNSTISIDEV
SQIKTTGGLASGSVILKGSDVFYAEESTINIDQDSDLDDSADTYQKNQSHIANSNVNLLS
GMTISGSKNDQYGIGQEDYKNSGVTLTNAGDIILTGSGTTGIYGNNAKIINNGNITTGDS
STGIFSSNNAEVTNTGNINFGNSGIGIYGINTYGSKVPSSGSKVPSSFNKINITMSSGTI
TADGTTEGYGIFANNSKGYGFSEVNFDGGLIDLSKISAADKSKAVAVAVKDTDLSSSGNI
NTAENGIAFYINGGNTSITGGTINLDKDNSIGLALQNIDTSSFTGTGAAFNIDGNGVILF
HLKDSTGIKDDFTVNVASGSNYRYADMKNSSFTFDKSFSIEDNINLIVADASAVLLGTSS
DISSAGTGNIGVYAKNKASAAVLSSLGVSDEITNKGKINLGDSSTGIYAEGGAGLLNETA
GIINVGDNSQGIYARNSGSAVNRGKISIGDSSIGIYFNNASAAVNYGDITSGSDNGVAVY
MDDQTAGFRNDGLISLSGQNNIGIYDTGTGIRVIDNNGEISVGDSASADSPNVGIYSVDG
SLTINHNTNAKITAGINSMGIYAKNTKINAEGIINIGDNGTGIYADSGSNVYLGSNARLN
LGAVNAAGVYALDGSIVDNYTSNIIYPSDSYAFVLNSGAVLNNYAANTMLDNGKVYAYSD
NAVINNKGNFTLTGTDNIVLYGVNSSAVTNSGKIDAGVTQGSNIGIYVKESSAVNSGKII
MGDSVIVDEYNPFVNKYSVAIYGENSDILNDTNGSVSVGENSAGLYAVGGSIVNKGTVTS
VKNGAIGIFIDNGTAENTGLIDLYGADSVGLAGKTGAVLTNSGTIRIHGDNSIGIFANLS
SSVINKGTIEVLGNNSTGIHLQGNSVLLNEGTIVLGSNLSESVKVSYSTGYDIPEIQNAG
IIKVSEKFEVPADFQISIKPAPSSFREPTASEIFSDNYALEDIDGRYLISNAVSFVAPYF
AATEPVVVLPDFSQHTNALAYKLEDVFVPTTPDGGPNSGKVRVKSKSITWDVIPDENADG
NIDLWMVKIPYNVYTNGLWYDGFGKSLDANYAGANAEGIEIFDKIDYIDNEKDLRHIMAS
LGGSVYSNINQREEDIAEVFESSLDLLQSSHNNTKENVKINVIAGKGNRKEKTDGVEEYD
SAYTGVMALREVERTYRHTFGYSAGYLHSGFEFKDGNESEEWVDTLQLGVHSKYRADNWE
LRNDLTARGSIHNIDRNIDWPSPNSRSEMNGTYETYSLTSDNRLGKEFGVGKNASVTPYG
GIRAMYVVRPTFEEEGLERLKVEGNDAWSVKPRAGVELKASVPIGKNSAWKVKGTLDLAY
EYELANLNERERAQLVAAEDGYHDLAKPEEEKGQFKTRAAIGVEVEERYGVFLTGEYVAG
EKSQEEYRAGVTLKAVF
NT seq
6714 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaaaattttttgatgttttttctggcggtaaatgcttttgctgtttcccaa
ggagcagcagaaagtataaaacgtccggaaaaatatgaaaaactttataacgggatggtc
cagaacatagaagctggaaaatctaacgtaaaaaattatgaagtattggaaaaaatactt
gaaaaaagaaataaagagcttaaggatctctatgagcagagtgattacatcgtaaaaccc
gagtatctggaatggcagatatttttcagcggtttttattctcacagagaatcgggggat
aacacacttgccaatggtacttaccactctgatccgagcaatgtaaacggaaaattttac
acagctctgggagaagcaaagcaggtagatctgggattatatattccagagcgtactata
aaaagaagtcctgtagaattaaaactggtaagtcctccggaaataaatctgagcagtctt
gatgtaaatccggaagtgaacccaagcgtaagtccggatgctgcttcgggtacttataag
gaatatacgcctgtcggcagtatgaaaagctttcttgaggcttatgagaatgtttttaag
tcagaaacaaacagccagctaaaagatgacggagttacagagcttataaattcaggagat
cccagtagttcttacaaaataaattataatgtaaatactggtttaaatataacttatgat
actgtaacagattcttttagtgagaataaactttttacaaatggtgattctctggtaact
tggggaacgaattcaataacgacttcttatggaaatactgcaaatgatcctgcattttat
ggaggaggaacacgggtagcgggagtttacggcggaactggcaacagtattacgaacagc
aatcagatggatttaaaaggaccgtttacttatggaatggttgctgaaggtggtaacagc
aatactttgattaataattccacaggaataataagtgatgataaggaaaatgatattacc
gatacatggtataataatgaaatccctcatatcggggaaactataacttatactcaggaa
aaaacaacttcagatccgaatatagtaataaatgatccatatagaacaacaacagtatct
aaacatccagacggaaacataatatatgtaaatggaagacctgtatacagacatggaggg
acggcgacaaatcctgatgtttcgtcaactgtgacaacaattgattcgattgattataca
cgaacaacttccgttacttcatatacaggcggatatctcggatataaagtgggaatgttt
gtaaacagtaatttgaatccgataaatacaatcatacaaaatgacggtaaaattaaattt
aacggttatagttcaataggtatgtatacttctgccggtgtcagattatctgatgttcag
atgctcaatacagcaactatagatataaatacaggcaattatactggatattctaatttt
ggaatgaaactagacggcgttgttaataacgaccagactaaaaaaataatttcaaatacc
ggaacaattagcataagtaacggagccggtatagcagtagtaaacggaagcgtcggagaa
ggctttgtggaaaattcggggacaatcactgtaacaaatggaaccggagtttatctggca
ccagtgtcaactagtgcaagattagaagatgcggtaaatacagcttccggaattattgat
gtaacttccggagccggaatgtacgctttaggcggacgtgacgaaataacaagagttata
aataacggggaaatatctgttttaggcggaatgggtatggttgcttcgggtaaaaatgct
gaagcagttaatacaagcaatgattttaaaataaagacttctacaggcggcttctatgca
cataacggcggaaaggtcattaatagtgcagatttgactgttaattcttcaggagtatcc
ctgtttaatattgatgttaattctgaaggaagcagtgtaggaaatataataatggacggt
accaattcagttgctgtttataataaagggaaatttacatcaactggcgatattgatata
gccaaaagcgggtcaattgctgtatatagtactggaacagataatacaaatataaaagcc
gatactataaaacttgacggagcaaagggagcagcattttatacagacggcggaaaaata
aatatatctccgaatacagggacaacaacagctgtaacagtgtcaggagactcgtcatac
ttattttatgacagcagctttaaaacaggagctgttccaaatcagacttttgtaatagac
ggaaattttactgctaatgtaaaagatggggctatagcttttgactttaaaaataattca
ggaaatcttatagattatgtaaaaaatagtcttttgaatataaagagcggaacaacaact
attaatatagaaggaacagcatttcatgcaaaaaattccactataagtattgatgaagtt
tcgcagataaaaacaactggcggtcttgcatcaggctctgtcatattaaaaggaagcgat
gtattttatgcagaagaaagtacaattaatatagatcaggattctgatcttgatgattct
gcggatacataccaaaaaaatcagagtcatatagcaaattcaaatgtaaatcttctgtct
ggcatgactatatcgggaagtaaaaatgatcagtatggaatcgggcaggaagattacaaa
aacagcggtgttactttaacaaatgccggtgatataattcttacaggatcaggaactacc
ggaatatacgggaataatgcaaaaattataaataatggaaatataacaactggagacagc
agtacaggaattttttcatcaaataatgcagaagttacaaataccggaaatataaacttc
gggaattccggtataggaatttacgggataaatacttacggttccaaagtaccttcttcc
ggttccaaagtaccttcttcatttaataaaataaatataacgatgtcatcgggaactata
acagctgacggtactacagaaggctacggtatttttgcgaataattcaaaaggatatgga
ttttctgaggtaaacttcgatggagggttaattgatctcagcaaaatttctgctgcggat
aaaagcaaggcagtggctgtagctgtaaaggatacagacttaagctcgtcaggaaatatt
aataccgctgaaaacggaatagctttttatataaacggaggaaatacaagtataacaggc
ggtactattaatttagacaaagataattcaataggtctggctcttcaaaatatagataca
agcagttttacaggtacaggagctgcatttaatatagatggaaacggtgtaattcttttt
catttaaaagactcaacaggaataaaggatgattttacggtaaatgttgcatcaggttct
aattacagatatgcagatatgaaaaacagctcatttacttttgataaatcctttagtata
gaggataatataaatcttatagttgctgatgcttcggctgttcttctggggacaagctcg
gatattagttccgcaggaacgggaaatataggggtatatgctaaaaataaagcttcagct
gcagttttaagttctctcggggtttcagacgagataacaaacaaaggaaaaatcaacttg
ggggattcttctacaggaatttatgcagaaggcggtgccggattattaaatgaaactgcc
ggaatcattaatgtaggagataattcacaggggatttatgcaagaaattccggatcagca
gtaaacagaggaaaaataagcatcggagattcttcaataggaatttattttaataatgca
tctgcagcagtcaattacggagatataacaagcggctcggataatggcgtggcggtttat
atggatgatcagacagcaggctttagaaatgacggtctgatttcattaagcggtcagaat
aatataggtatttacgatacgggaactggtatcagagttattgataacaacggggaaata
tcagtaggagattcagcttcggcagacagtccgaatgtaggtatatattctgtagacggt
tctctgacaataaatcataatacaaatgccaaaattactgccggaataaattcaatggga
atttatgcaaaaaatacaaaaataaatgcagagggaataataaatattggagataacgga
acaggaatatatgctgattcgggatcaaatgtgtatctcggcagcaatgcaaggctgaat
ctgggagctgtaaatgcagctggagtatatgcactcgacgggagtatcgtcgataactat
acttctaatataatatatccgtcggattcttatgcatttgtactgaattcaggggcagtt
ttaaataattatgctgcaaataccatgcttgataacggaaaagtatacgcatattctgat
aatgcagtaataaataataaggggaattttaccctgacaggtactgataatatagtttta
tacggagttaacagctctgcagtaactaattcaggaaaaatagatgcaggcgtaactcag
ggaagcaatataggaatatatgtaaaagaaagcagtgcggtaaacagcggaaaaataata
atgggagattctgttattgttgatgaatataatccttttgtaaataaatattcagtagca
atatatggagaaaattccgatattttaaatgatacaaacggttctgtttctgtcggagaa
aactctgccggattatatgcagtaggcggaagtatagtaaataaagggacggtaacttct
gtaaaaaacggtgcaatcggaatatttatagataacggtactgcagaaaatacaggtctc
atagatttatacggagctgattcagtagggcttgcagggaaaacaggggcagtacttact
aactcgggaacaataagaattcatggagataattccatagggatttttgcaaatttaagt
tcttcggtaataaacaagggaactattgaagtattggggaataacagtacaggaatacat
cttcagggaaactcggtacttttgaatgaaggaactatagtactcggatcaaatctttcg
gaatctgtgaaggtatcatattcaacaggatacgacatacctgaaatacagaatgccgga
ataataaaagtatccgaaaaattcgaagttcctgctgattttcagatttcaataaagccg
gctccttcttcattcagagaaccgactgcatctgaaatattctcagataattatgctctt
gaagatatcgacggaagatatttgatatcaaatgcagtaagctttgtggcgccatatttt
gccgcgacagagcctgtagtagtactgcctgatttttcacagcatacaaatgcactggca
tataagcttgaagatgtttttgttcctaccactcctgacggaggaccgaattcaggcaaa
gtaagggtaaaaagcaaatctattacatgggatgttattcctgatgaaaatgctgacgga
aatatagatctctggatggtgaaaattccttataatgtttatactaacggtctttggtat
gacggcttcggaaaatcgctagatgcaaattatgccggagcaaatgcagaaggaatagaa
atcttcgataaaatagattatatagataatgaaaaagatctaagacatattatggcaagt
ttgggaggaagtgtatattccaatataaaccagagagaggaagatatagcagaggtattc
gaaagctcgctggatcttctgcaaagctcgcataataatacaaaagaaaatgtgaagata
aatgtaattgccggaaaaggaaacagaaaagaaaagacagacggtgtggaagagtatgat
tctgcatatacaggagtaatggctctgagagaagtagaaagaacatacagacatactttc
ggatattcggcaggatatcttcattcaggctttgaattcaaagacggcaatgaaagcgaa
gaatgggtagatacattgcagcttggagttcacagtaaatacagggcagataactgggaa
ctgagaaatgatcttacagcaaggggaagtattcataatatagacagaaacatagactgg
ccgtctccgaacagcagatctgaaatgaacggtacatatgaaacttacagtcttacaagt
gataacagactcggaaaagagttcggagtaggaaaaaatgcttctgtaacaccttatgga
ggtattagggcaatgtatgtggtaagaccgacttttgaagaggaaggtttggaaagatta
aaagtcgagggtaatgatgcatggagtgtaaaaccaagagccggagtagagcttaaagct
tcggttccgattgggaaaaacagtgcatggaaagtaaaaggaactttggatcttgcttat
gagtatgagcttgctaatctgaacgagagagaaagagctcagcttgtagcagcggaagac
ggttatcatgatcttgcaaagccggaggaagaaaaaggacagtttaaaacaagggcagca
ataggggtagaagtagaagaaagatacggagtctttttgacaggcgaatatgtagcaggt
gaaaagagtcaggaagagtatagagctggagtaacattaaaggctgtattctaa
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