KEGG   Streptomyces sp. 4F: ASR50_24145Help
Entry
ASR50_24145       CDS       T04265                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
strf  Streptomyces sp. 4F
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:strf00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    ASR50_24145
Enzymes [BR:strf01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ASR50_24145
DNA repair and recombination proteins [BR:strf03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     ASR50_24145
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(5365634..5366515)
Genome map
AA seq 293 aa AA seqDB search
MAPITEVEGRRLPLSNLEKVLYPATGFTKAEVLHYYATVADVLLPHLRERPVSFLRYPDG
PDGQVFFTKNVPPGTPDWVTTAEVPRSEGPARMVLVEDLPSLMWAANLVAEFHTHQWRIT
DPGQADRIVFDLDPGPPATVVHCCEVALWLRERLAEDGFEAYAKTSGSKGLHLLTAARGS
SSEQVSDYAKALAVEAEKAMPRLVLHQMKRSLRPGKVFVDWSQNAARKTTAAPYTLRARA
EPLVSAPVTWQEVEECRSPGGMALQAPDIPPRLQDFGDLLAPLLDPDEAGTLP
NT seq 882 nt NT seq  +upstreamnt  +downstreamnt
atggctcccatcacggaggtggaggggcgacggctcccgctcagcaatctggagaaggtg
ctgtatcccgccaccggcttcaccaaggcggaggttctgcactactacgcgaccgtggcc
gacgtgctgctgccgcatctgcgggagcggccggtgtcgttcctgcggtatccggacggg
cccgacgggcaggtgttcttcaccaagaacgtgccgcccggtacgcccgactgggtcacg
accgccgaggtgccgcggtcggaggggcccgcgcggatggtgctggtggaggatctgccg
agcctgatgtgggcggcgaacctggtcgcggagttccacacccaccagtggcggatcacc
gaccctgggcaggcggaccgcatcgtgttcgacctggacccgggtccgccggcgacggtc
gtgcactgctgcgaggtggcgctgtggctgcgggagcggctggccgaggacgggttcgag
gcgtacgcgaagacgtccgggtcgaaggggctgcacctgctgacggcggcacggggctcc
tcatccgaacaggtgtccgattacgcgaaggcgctggccgtggaggcggagaaggcgatg
ccccggctggtgctgcaccagatgaagcgcagcctgcgaccggggaaggtcttcgtcgac
tggagccagaacgcggcgcgcaagaccacggccgccccctacaccctgcgggcccgcgcc
gagccgctggtgtcggcgccggtgacctggcaggaggtcgaggaatgccggtcgccgggc
gggatggcactgcaagcgcccgacatccccccacggctgcaggacttcggcgacctgctg
gcaccgctgctggacccggacgaggcgggcacgctgccctga

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