KEGG   Streptomyces sp. Mg1: M444_23395Help
Entry
M444_23395        CDS       T03958                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
strm  Streptomyces sp. Mg1
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:strm00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    M444_23395
Enzymes [BR:strm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     M444_23395
DNA repair and recombination proteins [BR:strm03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     M444_23395
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
1:5343699..5344598
Genome map
AA seq 299 aa AA seqDB search
MAPITMVEGRRISLSNLDKVLYPETGFTKGEVLHYYATVAGSLLAHVHDRPVSFLRYPDG
PDGQLFFTKNPPPGTPAWVPTTPVPRSDDPAAEQIVVADLPSLMWAANLVVEFHTPQWTI
GSPAVADRLVFDLDPGPPATVVECCAAALWLRGRLAADGLEAYAKTSGSKGLHLAVSVEP
TASDRVSAYAKALAQEAERELPGLVVHRMAKALRPGKVFVDHSQNAAAKTTAAPYTLRAR
ARPTVSAPVSWQEVEACRTPADLVFLAGDIPPRLARDGDLLAPLTDPGRAGRLPGGTPP
NT seq 900 nt NT seq  +upstreamnt  +downstreamnt
atggcgccgatcacgatggtggaggggcgtcgcatctccctcagcaatctcgacaaggtc
ctgtaccccgagaccggcttcaccaagggcgaggtgctgcactactacgccaccgtcgcg
ggatcgctgctggcccacgtccacgaccggccggtgtcgttcctgcgctaccccgacggc
ccggacggccagctgttcttcaccaagaacccgccgcccggcacccccgcatgggttccg
accacccccgtgccccgctccgacgaccccgccgccgagcagatcgtcgtcgccgacctg
ccgtccctgatgtgggccgcgaacctcgtcgtcgagttccacaccccccagtggaccatc
ggcagccccgccgtcgccgaccgcctggtcttcgacctcgaccccggaccgcccgccacc
gtcgtcgagtgctgcgccgccgcgctgtggctgcgcggccggctcgccgccgacggcctg
gaggcctacgccaagacctccggctccaagggcctccacctggccgtttccgtggagccg
accgcctccgaccgggtgtccgcgtacgcgaaggcgctcgcccaggaggccgagcgcgag
ctccccgggctcgtcgtccaccggatggccaaggcgctgcgccccggcaaggtgttcgtc
gaccacagccagaacgccgccgccaagaccaccgccgcgccgtacacgctgcgcgcccgc
gcccggcccaccgtctccgcgcccgtgtcgtggcaggaggtggaggcctgccgtaccccc
gccgacctggtcttcctcgccggtgacatcccgccgcggctggcccgcgacggcgacctg
ctggccccgctcaccgacccaggccgcgcgggccgcctccccggcgggaccccgccgtga

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