Streptococcus thermophilus MN-ZLW-002: Y1U_C1382
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Entry
Y1U_C1382 CDS
T02116
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
stw
Streptococcus thermophilus MN-ZLW-002
Pathway
stw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stw00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Y1U_C1382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stw03021
]
Y1U_C1382
Transcription machinery [BR:
stw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Y1U_C1382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DprA_WH
DBD_HTH
DUF2316
Motif
Other DBs
NCBI-ProteinID:
AFJ83831
LinkDB
All DBs
Position
complement(1351258..1352367)
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AA seq
369 aa
AA seq
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MATKKQNTAFNVQVADFIRNHKKAGTAIDDEITEKLVIPFVLDADGIDDLLERLTDGGIS
ITDKDGNPSSKYVVEAPKPEELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLSNEEEKEL
AIAVENGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQL
DEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRS
KQLKDFIED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaaaaaacaaaatacagcatttaacgttcaagtcgctgatttcattcgtaat
cacaaaaaagctggtacagcaattgatgatgaaatcacagaaaaactagttatcccattt
gttttagatgctgatgggattgatgaccttttggaacgtttgacagatggtggtatctct
attactgataaagatggaaatccttcatctaaatatgttgttgaggcaccaaaaccagaa
gagcttacagacgaggagcttcttggttcaaactcagctaaagtcaatgaccctgttcgt
atgtacctcaaagagattggggtagtgcccctcttgagtaacgaagaggaaaaagaatta
gctatcgctgttgaaaatggtgatttggaagctaaacaacgtttggcagaagccaacctt
cgtttggtagtctcaatcgctaaacgctatgtcggacgtggcatgcagttcttggacttg
attcaagagggtaacatggggcttatgaaagccgttgataaatttgactactcaaaaggt
ttcaagttttcaacttatgcgacatggtggattcgtcaagcaatcactcgtgccatcgca
gaccaagcacgtaccatccgtatcccagttcacatggttgaaactatcaataaattggta
cgtgagcaacgtaacctcttgcaagagttgggacaagacccaacacctgagcaaattgct
gagcgtatggatatgacaccagataaggttcgtgaaatccttaagattgctcaagaacca
gtctcacttgaaacacctatcggtgaagaggatgacagccatttgggtgattttatcgaa
gatgaagttatcgaaaatccagtagattacacaactcgtgtcgttcttcgtgaacaattg
gatgaggtgcttgatacccttacagaccgtgaagaaaatgttctacgtctccgtttcggt
cttgatgatggtaagatgcgtaccttggaagatgttggtaaagtcttcaacgttactcgt
gaacgtattcgtcagatcgaagctaaagcccttcgaaaattacgccatccaagtcgcagc
aaacaacttaaagactttattgaagactaa
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integrated database retrieval system
