Streptococcus uberis: SUB0439
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Entry
SUB0439 CDS
T00849
Symbol
holB
Name
(GenBank) putative DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sub
Streptococcus uberis
Pathway
sub03030
DNA replication
sub03430
Mismatch repair
sub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SUB0439 (holB)
03430 Mismatch repair
SUB0439 (holB)
03440 Homologous recombination
SUB0439 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sub03032
]
SUB0439 (holB)
03400 DNA repair and recombination proteins [BR:
sub03400
]
SUB0439 (holB)
Enzymes [BR:
sub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SUB0439 (holB)
DNA replication proteins [BR:
sub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SUB0439 (holB)
DNA repair and recombination proteins [BR:
sub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SUB0439 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
CAR41107
UniProt:
B9DTV8
LinkDB
All DBs
Position
431234..432109
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AA seq
291 aa
AA seq
DB search
MTIETQAPKAYSAFKQVLQEDRLNHAYLFSGDYANLEMAIFLAKSCFCQEKTNGLPCQHC
RTCQLIENNEFSDMTLLEPSGQVIKTETVKEMMKNFSRTGYESEKQVFIIKDCEKMHVNA
ANSLLKYIEEPQSASYIFLLTNDDNLVLPTIKSRTQIFHFPKDEAFLSLEAQKKGLLKSQ
ADLLAKLAKNPEDLERLASENKVLDLMTLSQKFVSVLIKDKAKAYLEVNRLNHVASEKSD
QDTILKLLTFILANNYSQPNALHYLDALYQARLMWQSNVSFQNSLEYMVLS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgactattgaaacccaggccccgaaggcttattcggcatttaaacaagtgttacaagaa
gaccgattaaaccatgcctatttattttcaggcgattatgcaaatcttgaaatggctatt
tttcttgccaaatcttgtttttgtcaggaaaaaacgaatggtctcccttgtcaacattgt
cgaacgtgtcaattgattgaaaacaatgaattttctgatatgaccttgttagaaccatca
ggtcaagtcattaaaacagagactgtcaaagaaatgatgaaaaatttttctcggacaggc
tatgaaagtgaaaaacaagtttttattattaaagattgtgagaagatgcatgttaatgct
gctaatagtctcttgaaatatatagaagaaccacaaagtgcctcctatatttttctatta
acaaacgatgataatcttgttcttccaactataaaaagtcgcacacaaatttttcatttt
cctaaagatgaagcttttttatcccttgaggctcaaaaaaaaggactcttaaaaagtcag
gcggacttattggctaagctggctaaaaatcccgaggacttagagcgattggcatctgaa
aataaagtgcttgatttaatgacacttagtcaaaaatttgtatcagtacttattaaagac
aaggccaaagcctatcttgaagtcaatcgtcttaatcatgtagccagtgaaaaaagtgat
caagatacgattttgaaattattaacttttattctagccaataattatagtcaaccaaat
gccctccattaccttgatgcgctttatcaggcccgactcatgtggcagagtaacgtatct
ttccaaaatagtctagaatatatggtgctatcatga
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