Staphylococcus aureus subsp. aureus 71193 (MSSA): ST398NM01_1086
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Entry
ST398NM01_1086 CDS
T02043
Name
(GenBank) Zn-dependent hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sud
Staphylococcus aureus subsp. aureus 71193 (MSSA)
Pathway
sud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ST398NM01_1086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sud03019
]
ST398NM01_1086
Messenger RNA biogenesis [BR:
sud03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ST398NM01_1086
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GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
DUF4152
Motif
Other DBs
NCBI-ProteinID:
AFH69309
LinkDB
All DBs
Position
complement(1005269..1006966)
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AA seq
565 aa
AA seq
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MKQLHPNEVGVYALGGLGEIGKNTYAVEYKDEIVIIDAGIKFPDDNLLGIDYVIPDYTYL
VQNQDKIVGLFITHGHEDHIGGVPFLLKQLNIPIYGGPLALGLIRNKLEEHHLLRTAKLN
EINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVGKPANIAK
MAQLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNIYRVQQ
AVEAAIKNNRKIVTFGRSMENNIKIGMELGYIKAPPETFIEPNKINTVPKHELLILCTGS
QGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINSLYKAGADVIHSKI
SNIHTSGHGSQGDQQLMLRLIKPKYFLPIHGEYRMLKAHGETGVECGVEEDNVFIFDIGD
VLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFNTNKL
LSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNQNKDIQWHQIKSSIIETLQPYLF
EKTARKPMILPVIMKVNEQKESKNK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattacatccaaatgaagtaggtgtatatgcacttggaggtctaggcgaaatc
ggtaaaaatacttatgcagttgagtataaagacgaaattgtcattatcgatgcaggtatc
aaattccctgatgataacttattagggattgattatgttatacctgactacacatatcta
gttcaaaaccaagataaaattgttggcctatttataacacatggtcacgaagaccatata
ggcggtgtgcccttcctattaaaacaacttaatatacctatttatggtggtcctttagca
ttaggtttaatccgtaataaacttgaagaacatcatttattacgtactgctaaactaaat
gaaatcaatgaggacagtgtgattaaatctaagcactttacgatttctttctacttaact
acgcatagtattcctgaaacttatggcgtcatcgtagatacacctgaaggaaaagtagtt
cataccggtgactttaaatttgattttacacctgtaggcaaaccagcaaacattgctaaa
atggctcaattaggcgaagaaggcgttctatgtttactttcagactcaacaaattcactt
gtgcctgattttactttaagcgaacgtgaagttggtcaaaacgtagataagatcttccgt
aattgtaaaggtcgtattatatttgctaccttcgcttctaatatttaccgagttcaacaa
gcagttgaagctgctatcaaaaataaccgtaaaattgttacgttcggtcgttcgatggaa
aacaatattaaaatcggtatggaacttggttatattaaagcaccacctgaaacatttatt
gaacctaataaaattaataccgtaccgaaacatgagttattgatactatgtactggttct
caaggcgaaccaatggcagcattatcaagaattgctaatggtactcataagcaaattaaa
attatacctgaagataccgttgtatttagttcatcacctatcccaggtaatacaaaaagt
attaacagaacgattaattccttgtataaagctggtgcagatgttatccacagcaagatt
tctaacatccatacttcagggcatggttctcaaggtgatcaacaattaatgcttcgatta
atcaagccgaaatatttcttacctattcatggtgaataccgtatgttaaaagcacatggt
gagactggtgttgaatgcggcgttgaagaagataatgtcttcatctttgatatcggagat
gtcttagctttaacacacgattcagcacgtaaagctggtcgcattccatctggtaatgta
cttgttgatggtagtggtatcggtgatatcggtaatgttgtaataagagaccgtaagcta
ttatctgaagaaggtttagttatcgttgttgttagcattgattttaatacaaataaatta
ctttctggtccagatattatttctcgaggatttgtatatatgagagaatcaggtcaatta
atttatgatgcacaacgtaaaatcaaaactgatgttattagtaagttaaatcaaaataaa
gatattcaatggcatcagattaaatcttctatcattgaaacattacaaccttatttattt
gaaaaaacagctagaaaaccaatgattttaccagtcattatgaaggtaaatgaacaaaaa
gaatcaaaaaataaataa
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