Sulfurihydrogenibium sp. YO3AOP1: SYO3AOP1_1336
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Entry
SYO3AOP1_1336 CDS
T00715
Name
(GenBank) putative sigma54 specific transcriptional regulator
Organism
sul
Sulfurihydrogenibium sp. YO3AOP1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA
Mg_chelatase
AAA_7
nSTAND3
HTH_50
MCM
HTH_Tnp_ISL3
AAA_16
AAA_22
AAA_5
HTH_23
T2SSE
HTH_17
HTH_1
AAA_2
Zeta_toxin
Helicase_PWI
PAS_9
NACHT
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ACD66944
LinkDB
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Position
complement(1376427..1377647)
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AA seq
406 aa
AA seq
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MNYIDELYLIITDENLKIKRISESLLELLGYEHFDLIDENLNKFTDRNIKEFLDQKEFVI
FLKSKRGIQFKGYFKTTVLYDYFNNPKGYLFQFLETKDEKIDEDFMVFNTQNIKMKKILE
RASLVAQSDVSVLISGETGTGKSKLAKWIHLNSVRSRNNFVSVNCSAIPDTLFESEFFGY
EKGAFTGAVGSKPGKVELADGGTLFLDEIGDLSLTSQAKLLVFVDTKEFERLGSSKPRKS
DVRIISATNKDLIKEIQNKNFRSDLFYRLCVVRIEIPPLRERKEDIPLIVNSILAKKNKR
ISQQAMDAIVSKDWYGNVRELRAFLEAVSIFTANKEIIDVEDLNSEFVYFSEEGDVEISE
EVLFNEEKRIIEALKKSKGNKSKAAKLLGISPATLWRKIKQYKIEV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatagatgaattatatttaatcattacagatgaaaatttaaagataaaaaga
attagtgaaagtcttttagaacttcttggttatgaacattttgacttaatagatgaaaat
cttaacaaatttacagataggaacattaaagaatttttagaccaaaaagaatttgtaata
tttctaaaaagcaaaagaggaattcaatttaaaggctattttaaaaccacagtcttgtat
gattatttcaacaatccaaaaggatatctatttcaatttttagaaacaaaagatgaaaag
atagatgaagattttatggtctttaacactcaaaacataaagatgaaaaaaatcttagaa
agagcttctttggtagctcaatcagatgtatctgttttgatttctggagaaacagggaca
ggaaaatcaaaacttgctaaatggatccatttaaacagcgttagaagtaggaataatttt
gtatcggtaaactgttcagccattccggatacgctttttgagtcagaattttttggctat
gaaaaaggtgcgtttactggagcggttggctctaaacccggtaaagttgaacttgcagac
ggcggaacattatttttagatgaaattggagacctttctttaacttcccaagcaaaatta
ttagtttttgtagatacgaaagaatttgaaagacttggttcaagcaaaccaagaaaatct
gacgtaagaataatctcagctacaaacaaagacttgattaaagaaattcagaataaaaat
tttagaagtgatttattttatagattgtgcgtcgttagaatagaaattccaccattaagg
gaaagaaaggaagatattcctttgatagtaaatagcattttagctaagaaaaacaaaaga
atttcacagcaagctatggatgctatagtttcaaaagattggtatggtaatgtcagagag
cttagagctttcttagaagcagttagcatttttacagctaataaagaaattatagacgtg
gaagatctgaactctgaatttgtttatttttcagaagaaggagatgtagaaatttcagaa
gaagttctttttaatgaagaaaaaagaataatagaagcattgaagaaatcaaaaggaaac
aaaagtaaagctgctaagcttcttggaattagccctgctacgttgtggagaaaaataaag
cagtataagattgaagtatag
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