Sulfurovum sp. NBC37-1: SUN_0187
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Entry
SUN_0187 CDS
T00572
Name
(GenBank) ATP-dependent DNA helicase, UvrD/REP family
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
sun
Sulfurovum sp. NBC37-1
Pathway
sun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SUN_0187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sun03400
]
SUN_0187
Enzymes [BR:
sun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SUN_0187
DNA repair and recombination proteins [BR:
sun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SUN_0187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Cas_Cas4
PDDEXK_1
SLFN-g3_helicase
DUF374
DUF2499
Motif
Other DBs
NCBI-ProteinID:
BAF71147
UniProt:
A6Q6N8
LinkDB
All DBs
Position
189610..192345
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AA seq
911 aa
AA seq
DB search
MSFKPFLAYSASAGSGKTFALSVRYISLLFMGEPAGSILAATFTNKAAAEMRQRVVDSLR
HLGENKAFLDAIEVETGMSRDVLFRKQPEVLKRFLSSTSHIVTLDSFFSKILRSASLELG
LEPDFVTKEQPKEELEKHFLDEVDANGMLSDLVKLAMDIEDKRFKKIFDLMQNFYKVDPL
LPAQSEVTLSISKEEEACEILRLEMLKALENAGAPDRCLKQFDTKNTKELFNKKLFEKET
LGEHSWYKKIANGEIEAVYAALKQRLLLWAKAKEMVVLHHLFSIYDYYKNATITNARNSG
VLTFNDLSYFTYRLLQEMPSSEFLYFKIDAKFRHILLDEFQDTSTLQFLLLKPLIDEIFS
GQGQSDFKSFFYVGDTKQSLYRFRGGVEELFDKIAQRYGVQIEQMDTNYRSSRYVVEQVN
LWFKDTMEGYVPQKSKTDASEGYVEVFESEEIIDDAVVQAQRLLELGVDVDDIVFLVSTN
KDGQNLQEACEKEGIHTLLKTSSSLKNVPKVAALVAMVSYLFGGEKIDAEAMLLKVGKTL
DRIDLEWFSVFMSPLQIVDRLIREFGYFDNDRNMLKLLEFASSFSDIPTFLDEFRTSSIS
VAAHSIHGANIMTIHGSKGLEFEYVIVLDKLTRPNSDKAPLIFHYNDDLHIDQILYRTQN
REHFDGNYARIMEERRASSLKDRKNVLYVALTRAVEGLIVIKKPEGSIFDEINIFPIKIG
EISVKCPVLGVKEEKSRGSEVVSVTISDYGTQEVGTKEDEEEKDYEAILFGTALHYTLEI
MGDFDEQSLKSALVSLRNRYGQLLGHEGLAQIEKRVRSLIENETFQALLNEAKIMKEQSL
SFEGELKQIDLLLEYDDHMLVIDYKSSKKYALKHQAQVNYYKRAIEKIAKKPTEGMIIYL
LEDKIEIVNLK
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaaccttttttggcctattcggcatctgcggggagtggtaagacttttgcg
ctctctgtacgctacatctctctgctttttatgggagagcctgcaggaagcatactggca
gcgacatttacgaacaaggcggcagcagagatgcggcagcgtgtggtggattcactgcgt
caccttggggagaacaaggcattcctcgatgccattgaggtagagacagggatgagcagg
gacgtactgttccggaaacagccggaagtcttgaaacgatttctttcctctacatcccat
attgtgacactggacagttttttctcgaagatcctgcgttctgcctctctggaacttgga
cttgagcctgattttgtgactaaggaacagcccaaggaagagctggagaaacattttctg
gatgaagtagatgcgaacggtatgctttccgatctggtgaaactggccatggacattgaa
gataaacgcttcaagaagatatttgacctaatgcagaacttctacaaggtcgatccgctg
cttcctgctcagtcagaagtgacactttccataagcaaagaggaagaggcctgtgaaata
ctgcgtctggaaatgctcaaggcacttgaaaatgccggtgcgcctgaccgctgtctgaag
cagttcgataccaaaaacactaaagaactgttcaacaaaaagctgtttgagaaggagacg
ctgggtgagcattcctggtacaaaaaaatagccaacggggagatcgaagctgtttatgcc
gcacttaaacagaggctgctgctttgggcaaaagctaaagaaatggttgtactgcatcat
ctcttcagtatctatgattattacaaaaatgcaacgatcacgaatgcaagaaattcgggg
gtgcttacctttaatgacctgagctattttacctaccggcttttgcaggaaatgccttcg
agtgagttcctgtacttcaagatcgatgcaaagttcagacatattcttctcgatgaattt
caggacacctctacactgcagttcctgctgctcaaaccgcttatcgacgagattttttcc
ggacaggggcagagtgatttcaagtccttcttctatgtgggagataccaagcagtcactg
taccgttttcgtggtggggtggaagagctctttgacaagatcgcccagagatatggtgtg
cagatcgaacagatggacaccaactaccgaagcagcaggtatgtagtggaacaggtaaac
ctctggttcaaagatacgatggagggctacgtgccccaaaaaagcaaaacggatgcaagt
gagggatatgtagaggtctttgagtccgaagagatcattgacgatgcagttgtgcaggca
caacgtcttctggaacttggggtcgacgtagatgacatagtattcctggtcagtaccaac
aaggatgggcagaatctgcaggaggcctgtgaaaaagagggtattcatacactgctgaaa
acctcctcctctttgaagaatgtaccgaaggtcgctgcgctggtcgctatggtttcctat
ctgttcggtggggagaagatcgatgcggaagcgatgctcctgaaggtgggcaagacactt
gatcgaatcgatcttgagtggttctctgtttttatgagcccgttgcagatcgtggacagg
ctgatacgggaattcggctacttcgacaatgaccgcaatatgctcaaactattggagttc
gcctcatcgttttcggatatccctacatttttggatgagtttagaacctcgagtatttct
gtggcggcccactccattcatggtgcgaatatcatgacgatccatggttcaaaagggctg
gagtttgaatatgtgatcgtgctggacaagctgacgcgtcccaacagtgataaagccccg
cttatcttccattacaatgatgatctccatattgaccagatactctaccgaacacagaac
agggaacacttcgatggcaactatgcaaggattatggaggagagaagggcttcttctctc
aaggatagaaaaaatgtgctctatgtggcattgacccgtgcggtggagggattgatcgtt
attaagaagccggaagggtccattttcgatgagatcaatatctttccgataaagatcgga
gagataagcgttaagtgtccagtattgggtgtcaaggaagagaagagcagggggagcgaa
gtagtatcggtgactatttctgattacggtacacaggaggttggtacgaaagaggatgag
gaagagaaagactacgaagcgatcctttttggtacggcactgcactacacgctggagatc
atgggagattttgatgagcaaagcctgaaatcagccttggtctctctacggaaccgttac
ggacagcttttgggccatgaaggtttggcccagatcgaaaaacgggtcaggtctttgatt
gaaaatgaaacattccaggcactcttgaacgaggcaaagatcatgaaagagcagtcgctc
tcttttgaaggggaactgaaacagattgacctgcttctggaatatgacgaccatatgctg
gtgatcgattacaagagttcgaagaagtatgccctgaagcatcaggctcaggtcaattac
tataaaagagcgatcgaaaaaattgcaaaaaagccgactgaggggatgatcatttatctt
ttggaagataaaattgagatagtaaacttaaaataa
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