Staphylococcus aureus subsp. aureus 11819-97 (CA-MRSA): MS7_1233
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Entry
MS7_1233 CDS
T01950
Symbol
rnjB
Name
(GenBank) ribonuclease J 2
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
suz
Staphylococcus aureus subsp. aureus 11819-97 (CA-MRSA)
Pathway
suz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MS7_1233 (rnjB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suz03019
]
MS7_1233 (rnjB)
Messenger RNA biogenesis [BR:
suz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MS7_1233 (rnjB)
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
vATP-synt_E
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AEW65242
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Position
1301100..1302773
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AA seq
557 aa
AA seq
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MSLIKKKNKDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDEMLGIDIVIPDIS
YVLENKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTIALIKENMKARNIDKKVR
YYTVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPD
IKRMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIR
IQQVLNIASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIA
TGMQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVIIANTLNELVRAGAHIIP
NNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEK
GDVINYNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR
RIAAGPEIQSRGFVYVRESEDLLREAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKLL
FESTKRRPMIIPVISEI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttaataaagaaaaagaataaagatattcgcattataccattaggcggtgttggc
gaaattgctaaaaatatgtatatcgttgaagtagacgatgaaatgtttatgttagatgct
ggacttatgtttccagaagacgaaatgctaggtattgatattgttataccagacatttca
tacgtacttgaaaataaagataaattgaagggtatattccttacacacggacatgagcac
gcgattggtgcagtgagttatgttttagaacaattagatgcaccagtatatggatctaaa
ttgacaatagcgttaattaaagaaaatatgaaagcccgtaatattgataaaaaagttcgc
tactacacagttaataatgattcaattatgagattcaaaaacgtgaatattagtttcttt
aatacgacacacagtattcctgatagtctaggtgtttgtattcatacttcatatggtgcc
attgtgtatacaggtgaatttaagtttgaccaaagtttacatggacattatgcaccagat
attaaacgtatggcagagattggtgaagaaggcgtatttgtcttaatcagtgattctact
gaggcagagaaacctggatataatactccggaaaatgtgattgaacatcatatgtatgac
gcttttgcaaaagtgcgaggtcgcttgattgtttcatgttatgcttcgaactttatacgt
attcagcaagttttaaatattgctagcaagctaaatcgtaaagtgtcatttttaggaaga
tcacttgaaagttcatttaatattgctcgtaaaatggggtatttcgacattcctaaagat
ttgctaattcctataacagaagttgataattatcctaaaaatgaagtgataattatagct
actggtatgcaaggagaacctgtagaagccttaagtcaaatggcgcaacataagcataaa
attatgaatatcgaagaaggcgattctgtatttttagcaattacggcttctgctaatatg
gaagttatcattgcgaatacattaaatgagcttgtacgtgctggcgcacatattattcca
aataacaagaagattcatgcttcaagtcatggttgcatggaagaattaaaaatgatgatt
aatattatgaaacctgaatactttattcctgtacaaggtgaatttaaaatgcagatagca
catgcgaagctagcagctgaagcaggtgttgcaccagaaaagattttccttgtggaaaaa
ggagatgtcattaattacaacggtaaagatatgatattaaatgaaaaggtaaattcagga
aatattttaatagatggtattggtattggggatgtaggaaatatcgtgttgagagaccgt
catcttttagcagaagatggtatctttattgctgtagtaacgttagatcctaaaaataga
cgtatagctgcgggacctgaaattcaatctcgtgggtttgtatatgtacgtgaaagtgaa
gacttattacgtgaagcagaagagaaagtacgtgaaatagtagaggctggtttacaagaa
aaacgcatagaatggtctgaaattaagcaaaatatgcgtgatcaaattagtaaactatta
ttcgaaagtacaaaacgtcgtcctatgattattccagtaatttctgaaatttaa
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