Streptomyces venezuelae: SVEN_3309
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Entry
SVEN_3309 CDS
T02274
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sve
Streptomyces venezuelae
Brite
KEGG Orthology (KO) [BR:
sve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sve03032
]
SVEN_3309
03400 DNA repair and recombination proteins [BR:
sve03400
]
SVEN_3309
Enzymes [BR:
sve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SVEN_3309
DNA replication proteins [BR:
sve03032
]
Prokaryotic type
DNA Topoisomerases
SVEN_3309
DNA repair and recombination proteins [BR:
sve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SVEN_3309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_2
Toprim_4
HC2
Motif
Other DBs
NCBI-ProteinID:
CCA56595
UniProt:
F2RAB3
LinkDB
All DBs
Position
complement(3622875..3625823)
Genome browser
AA seq
982 aa
AA seq
DB search
MYRHTPQRRERHRPCRCRACQRRTCPESVEPERRAKLSPTSEAAHGGRRLVIVESPAKAK
TIKGYLGPGYVVEASVGHIRDLPSGAAEVPEKYTGEVRRLGVDVEHDFQPIYVVNADKKA
QVRKLKELLAESDELFLATDEDREGEAIAWHLQEVLKPKVPVHRMVFHEITKDAIREAVA
NPRELNQRMVDAQETRRILDRLYGYEVSPVLWKKVMPRLSAGRVQSVATRLVVERERERI
AFRSAEYWDLTGTFGTGRSGDASDPSQLVARLAAVDGKRVAQGRDFGADGRLKSESVLHL
DEANARALAAALADTAFSVRSVESKPYRRSPYAPFRTTTLQQEASRKLGFGAKATMQVAQ
KLYENGFITYMRTDSTILSDTAVSAARAQVTQLYGADYLPEKPRVYAGKVKNAQEAHEAI
RPSGDRFRTPAETGLTGDQFRLYELIWKRTVASQMKDATGNSVTVKIGGRAADGRDAEFS
ASGKTITFHGFMKAYVEGADDPNAELDDRERRLPQVAEGDALTADEITADGHATKPPARY
TEASLVKELEEREIGRPSTYASIIGTILDRGYVFKKGTALVPSFLSFAVVNLLEKHFGRL
VDYDFTAKMEDDLDRIARGEAQAVPWLKRFYFGDAGGGTAAAGGAADAGNGDGDHLGGLK
ELVTDLGAIDAREISSFPVGNDIVLRVGRYGPYVERGEKDAEGHQRADVPEDLAPDELTV
ELAEELLAKPSGDFELGADPVSGNQIVAKDGRYGPYVTEILPEGTPKTGKNAVKPRTASL
FKSMSLDTVTLEDALRLMSLPRVVGADAEGVEITAQNGRYGPYLKKGTDSRSLTEEEQLF
TITLEEALAIYAQPKQRGRAAAKPPLKELGTDPVSEKPVVVKDGRFGPYVTDGETNATLR
TGDSVEDITPERGYELLAEKRAKGPAKKAAKKAPAKKTTTAKKTATKTAAKKTTAAKKTA
VKKTTTAKKTTAAKKTAAAKPE
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
ttgtaccgtcacactccgcagcgacgggagcgtcaccgtccgtgccgctgccgtgcgtgc
cagcgccgtacgtgcccagagagtgtcgaaccggagagaagagcgaagttgtccccgacc
agcgaagccgcacacggcggccgccgactcgtcatcgtcgagtcgcctgccaaggcgaag
acgatcaagggttacctcggccccggctacgtcgtcgaggcgagcgtcgggcacatccgg
gacctccccagcggtgccgccgaggtgcccgagaagtacaccggtgaggtgcgccgcctc
ggggtcgacgtcgagcacgacttccagcccatctacgtcgtcaacgccgacaagaaggcg
caggtcaggaagctcaaggagctgcttgccgagtccgacgagctcttcctcgccaccgat
gaggaccgcgagggcgaggccatcgcgtggcacctccaggaagtcctgaagcccaaggtc
ccggtccaccggatggtcttccacgagatcaccaaggacgccatccgcgaggccgtcgcc
aacccgcgcgagctgaaccagcgcatggtcgacgcccaggagacccgccgcatcctcgac
cggctgtacggctacgaggtctcgccggtcctgtggaagaaggtcatgccgcgcctctcg
gccggccgtgtccagtccgtcgccacccgtctcgtcgtcgagcgggagcgcgagcgcatc
gccttccgctccgccgagtactgggacctcaccggcaccttcggcaccggccgctccggt
gacgccagcgacccgtcccagctggtcgcccgcctcgcggcggtcgacggcaagcgcgtc
gcgcagggccgtgacttcggtgccgacggccgtctgaagagcgagagcgtgctccacctg
gacgaggcgaacgcccgcgccctggccgccgcgctcgccgacaccgccttctccgtgcgc
tcggtcgagtcgaagccgtaccgccgctccccgtacgcccccttccggaccaccaccctc
cagcaggaggcgagccgcaagctgggcttcggtgcgaaggcgaccatgcaggtggcgcag
aagctgtacgagaacggcttcatcacctacatgcgtacggactccacgatcctctccgac
accgccgtctcggcggcgcgggcgcaggtcacgcagctgtacggcgccgactacctgccg
gagaagccgcgcgtctacgcgggcaaggtcaagaacgcgcaggaggcgcacgaggcgatt
cgcccttcgggtgatcgtttccgcaccccggcggagaccggtctgaccggcgaccagttc
cggctgtacgagctgatctggaagcggaccgtcgcctcccagatgaaggacgcgaccgga
aactcggtcacggtgaagatcggcggccgcgccgccgacggccgggacgccgagttcagc
gcctccggcaagacgatcaccttccacggcttcatgaaggcctacgtcgaaggcgccgac
gacccgaacgcggagctcgacgaccgcgagcggcggctgccgcaggtcgccgagggcgac
gcgctgaccgccgacgagatcacggcggacggccacgcgaccaagccgccggcccgctac
accgaggcctcgctggtcaaggagctcgaagagcgcgagatcggccgcccgtcgacgtac
gcgtcgatcatcggcacgatcctcgaccgcggctacgtcttcaagaagggcacggccctc
gtgccgtccttcctgagcttcgccgtcgtcaacctcctggagaagcacttcgggcggctc
gtcgactacgacttcaccgccaagatggaggacgacctcgaccgcatcgcgcgcggcgag
gcccaggccgtgccgtggctgaagcgtttctacttcggtgacgccgggggcggtacggcc
gccgccggcggcgccgcggacgccgggaacggcgacggcgaccacctcggcggtctgaag
gagctcgtcaccgacctcggcgcgatcgacgcccgcgagatctcctccttccccgtcggc
aacgacatcgtgctccgcgtcggccgctacggcccgtacgtcgagcgcggcgagaaggac
gcggagggccaccagcgggccgacgtccccgaggacctcgcgcccgacgagctgaccgtc
gagctcgccgaggagctgctggccaagccgagcggcgacttcgagctgggcgccgacccg
gtcagcgggaaccagatcgtcgcgaaggacggccgctacggcccgtacgtcacggagatc
ctgcccgagggcaccccgaagaccggcaagaacgcggtgaagccgcgcacggcctcgctc
ttcaagtcgatgagcctcgacaccgtcaccctggaggacgcgctccggctgatgtccctg
ccccgggtcgtcggcgcggacgccgagggcgtcgagatcaccgcgcagaacggccgctac
ggcccgtacctgaagaagggcacggactcgcggtcgctcaccgaggaggagcagctcttc
acgatcaccctcgaagaggcgctcgcgatctacgcccagccgaagcagcggggccgggcc
gcggccaagccgccgctgaaggagctgggcaccgacccggtcagcgagaagcccgtggtg
gtcaaggacggccgcttcggtccgtacgtgaccgacggcgagaccaacgccaccctgcgg
accggcgacagcgtcgaggacatcacgccggagcgcggttacgagctgctcgccgagaag
cgggccaagggaccggcgaagaaggccgccaagaaggccccggcgaagaagacgaccacc
gcgaagaagacggccacgaagacggcggcgaagaagaccaccgccgccaagaagacggcc
gtgaagaagacgacgacggcgaagaagacgaccgcggcgaagaagaccgcggcggcgaag
ccggagtag
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integrated database retrieval system