KEGG   Streptomyces venezuelae: SVEN_3309
Entry
SVEN_3309         CDS       T02274                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
sve  Streptomyces venezuelae
Brite
KEGG Orthology (KO) [BR:sve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sve03032]
    SVEN_3309
   03400 DNA repair and recombination proteins [BR:sve03400]
    SVEN_3309
Enzymes [BR:sve01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     SVEN_3309
DNA replication proteins [BR:sve03032]
 Prokaryotic type
  DNA Topoisomerases
   SVEN_3309
DNA repair and recombination proteins [BR:sve03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SVEN_3309
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_2 Toprim_4 HC2
Other DBs
NCBI-ProteinID: CCA56595
UniProt: F2RAB3
LinkDB
Position
complement(3622875..3625823)
AA seq 982 aa
MYRHTPQRRERHRPCRCRACQRRTCPESVEPERRAKLSPTSEAAHGGRRLVIVESPAKAK
TIKGYLGPGYVVEASVGHIRDLPSGAAEVPEKYTGEVRRLGVDVEHDFQPIYVVNADKKA
QVRKLKELLAESDELFLATDEDREGEAIAWHLQEVLKPKVPVHRMVFHEITKDAIREAVA
NPRELNQRMVDAQETRRILDRLYGYEVSPVLWKKVMPRLSAGRVQSVATRLVVERERERI
AFRSAEYWDLTGTFGTGRSGDASDPSQLVARLAAVDGKRVAQGRDFGADGRLKSESVLHL
DEANARALAAALADTAFSVRSVESKPYRRSPYAPFRTTTLQQEASRKLGFGAKATMQVAQ
KLYENGFITYMRTDSTILSDTAVSAARAQVTQLYGADYLPEKPRVYAGKVKNAQEAHEAI
RPSGDRFRTPAETGLTGDQFRLYELIWKRTVASQMKDATGNSVTVKIGGRAADGRDAEFS
ASGKTITFHGFMKAYVEGADDPNAELDDRERRLPQVAEGDALTADEITADGHATKPPARY
TEASLVKELEEREIGRPSTYASIIGTILDRGYVFKKGTALVPSFLSFAVVNLLEKHFGRL
VDYDFTAKMEDDLDRIARGEAQAVPWLKRFYFGDAGGGTAAAGGAADAGNGDGDHLGGLK
ELVTDLGAIDAREISSFPVGNDIVLRVGRYGPYVERGEKDAEGHQRADVPEDLAPDELTV
ELAEELLAKPSGDFELGADPVSGNQIVAKDGRYGPYVTEILPEGTPKTGKNAVKPRTASL
FKSMSLDTVTLEDALRLMSLPRVVGADAEGVEITAQNGRYGPYLKKGTDSRSLTEEEQLF
TITLEEALAIYAQPKQRGRAAAKPPLKELGTDPVSEKPVVVKDGRFGPYVTDGETNATLR
TGDSVEDITPERGYELLAEKRAKGPAKKAAKKAPAKKTTTAKKTATKTAAKKTTAAKKTA
VKKTTTAKKTTAAKKTAAAKPE
NT seq 2949 nt   +upstreamnt  +downstreamnt
ttgtaccgtcacactccgcagcgacgggagcgtcaccgtccgtgccgctgccgtgcgtgc
cagcgccgtacgtgcccagagagtgtcgaaccggagagaagagcgaagttgtccccgacc
agcgaagccgcacacggcggccgccgactcgtcatcgtcgagtcgcctgccaaggcgaag
acgatcaagggttacctcggccccggctacgtcgtcgaggcgagcgtcgggcacatccgg
gacctccccagcggtgccgccgaggtgcccgagaagtacaccggtgaggtgcgccgcctc
ggggtcgacgtcgagcacgacttccagcccatctacgtcgtcaacgccgacaagaaggcg
caggtcaggaagctcaaggagctgcttgccgagtccgacgagctcttcctcgccaccgat
gaggaccgcgagggcgaggccatcgcgtggcacctccaggaagtcctgaagcccaaggtc
ccggtccaccggatggtcttccacgagatcaccaaggacgccatccgcgaggccgtcgcc
aacccgcgcgagctgaaccagcgcatggtcgacgcccaggagacccgccgcatcctcgac
cggctgtacggctacgaggtctcgccggtcctgtggaagaaggtcatgccgcgcctctcg
gccggccgtgtccagtccgtcgccacccgtctcgtcgtcgagcgggagcgcgagcgcatc
gccttccgctccgccgagtactgggacctcaccggcaccttcggcaccggccgctccggt
gacgccagcgacccgtcccagctggtcgcccgcctcgcggcggtcgacggcaagcgcgtc
gcgcagggccgtgacttcggtgccgacggccgtctgaagagcgagagcgtgctccacctg
gacgaggcgaacgcccgcgccctggccgccgcgctcgccgacaccgccttctccgtgcgc
tcggtcgagtcgaagccgtaccgccgctccccgtacgcccccttccggaccaccaccctc
cagcaggaggcgagccgcaagctgggcttcggtgcgaaggcgaccatgcaggtggcgcag
aagctgtacgagaacggcttcatcacctacatgcgtacggactccacgatcctctccgac
accgccgtctcggcggcgcgggcgcaggtcacgcagctgtacggcgccgactacctgccg
gagaagccgcgcgtctacgcgggcaaggtcaagaacgcgcaggaggcgcacgaggcgatt
cgcccttcgggtgatcgtttccgcaccccggcggagaccggtctgaccggcgaccagttc
cggctgtacgagctgatctggaagcggaccgtcgcctcccagatgaaggacgcgaccgga
aactcggtcacggtgaagatcggcggccgcgccgccgacggccgggacgccgagttcagc
gcctccggcaagacgatcaccttccacggcttcatgaaggcctacgtcgaaggcgccgac
gacccgaacgcggagctcgacgaccgcgagcggcggctgccgcaggtcgccgagggcgac
gcgctgaccgccgacgagatcacggcggacggccacgcgaccaagccgccggcccgctac
accgaggcctcgctggtcaaggagctcgaagagcgcgagatcggccgcccgtcgacgtac
gcgtcgatcatcggcacgatcctcgaccgcggctacgtcttcaagaagggcacggccctc
gtgccgtccttcctgagcttcgccgtcgtcaacctcctggagaagcacttcgggcggctc
gtcgactacgacttcaccgccaagatggaggacgacctcgaccgcatcgcgcgcggcgag
gcccaggccgtgccgtggctgaagcgtttctacttcggtgacgccgggggcggtacggcc
gccgccggcggcgccgcggacgccgggaacggcgacggcgaccacctcggcggtctgaag
gagctcgtcaccgacctcggcgcgatcgacgcccgcgagatctcctccttccccgtcggc
aacgacatcgtgctccgcgtcggccgctacggcccgtacgtcgagcgcggcgagaaggac
gcggagggccaccagcgggccgacgtccccgaggacctcgcgcccgacgagctgaccgtc
gagctcgccgaggagctgctggccaagccgagcggcgacttcgagctgggcgccgacccg
gtcagcgggaaccagatcgtcgcgaaggacggccgctacggcccgtacgtcacggagatc
ctgcccgagggcaccccgaagaccggcaagaacgcggtgaagccgcgcacggcctcgctc
ttcaagtcgatgagcctcgacaccgtcaccctggaggacgcgctccggctgatgtccctg
ccccgggtcgtcggcgcggacgccgagggcgtcgagatcaccgcgcagaacggccgctac
ggcccgtacctgaagaagggcacggactcgcggtcgctcaccgaggaggagcagctcttc
acgatcaccctcgaagaggcgctcgcgatctacgcccagccgaagcagcggggccgggcc
gcggccaagccgccgctgaaggagctgggcaccgacccggtcagcgagaagcccgtggtg
gtcaaggacggccgcttcggtccgtacgtgaccgacggcgagaccaacgccaccctgcgg
accggcgacagcgtcgaggacatcacgccggagcgcggttacgagctgctcgccgagaag
cgggccaagggaccggcgaagaaggccgccaagaaggccccggcgaagaagacgaccacc
gcgaagaagacggccacgaagacggcggcgaagaagaccaccgccgccaagaagacggcc
gtgaagaagacgacgacggcgaagaagacgaccgcggcgaagaagaccgcggcggcgaag
ccggagtag

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