Saccharomonospora viridis: Svir_39650
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Entry
Svir_39650 CDS
T00980
Name
(GenBank) RNA polymerase, sigma subunit, ECF family
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
svi
Saccharomonospora viridis
Brite
KEGG Orthology (KO) [BR:
svi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svi03021
]
Svir_39650
Transcription machinery [BR:
svi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Svir_39650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_28
DUF134
HTH_23
Terminase_5
HTH_17
HTH_16
GerE
Motif
Other DBs
NCBI-ProteinID:
ACU98906
UniProt:
C7MS50
LinkDB
All DBs
Position
4294878..4295480
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AA seq
200 aa
AA seq
DB search
MTAAAPTDADLIAAHAAGDPHAFNELVRRHRDRMWAVALRTVRDPEEAADALQDAFISAF
RAASNFRAESQVTTWLHRIVVNACLDRVRRRQARPTVPLPDTSHQEPAVPRDSMAERETR
LIIKQALEQLPEEQRVPIVLVDVEGYSVAETAQLLGIAEGTVKSRCARGRAKLAKLLGYL
RNPSSEGGVPTHESKHGEGR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcagcagcgcccacggatgctgatctcatagccgcgcacgcggcgggagatccc
catgcgttcaacgagctcgtccgacgacatcgagaccggatgtgggctgtagccctgcgc
acggtccgcgacccggaggaggcggccgacgcgctgcaggacgcgttcatctccgccttc
cgcgccgcatccaatttcagagccgagtcccaggtgacgacgtggctacaccgaatcgtc
gtcaacgcctgtctcgatcgggtgagacgcagacaagcccggccgacggtaccgttgccc
gacacctcgcatcaggagcccgccgtaccccgcgactcgatggcggaacgggagacccgg
ctcatcatcaagcaggcactcgagcaactaccggaagaacaacgggtaccgatcgtgttg
gtcgacgtggaggggtactccgtcgccgagacggcacagctattgggtatcgccgaaggg
accgtgaagagtcggtgcgcacgcgggcgggccaaactcgcgaaacttctcggttatctg
cggaacccgagtagcgagggtggcgtcccaactcacgaaagcaaacacggggagggacga
tga
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