KEGG   Streptomyces violaceusniger: Strvi_1039Help
Entry
Strvi_1039        CDS       T01602                                 

Definition
(GenBank) DNA polymerase LigD, polymerase domain protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
svl  Streptomyces violaceusniger
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:svl00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    Strvi_1039
Enzymes [BR:svl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Strvi_1039
DNA repair and recombination proteins [BR:svl03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Strvi_1039
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
866789..867766
Genome map
AA seq 325 aa AA seqDB search
MSPIAEVEGRRIALRNLDKVIHPATGTTKGELLHYLASTADPLLGHLRGRPLAFLRYPDG
PDGQKFFTKNPPPGTPSWVTTVEVTRHKGETARQVLIEDLPSLMWAANLVVEFHAPMWRI
DQGVGIADRLVFDLDPGPPATIVDCRVVAVWLRERLAADGLTAYAKTSGSKGLHLLVPVE
PTPSHQVTAYARRLALEAANAMPDLVIRKMTRALRPGKVYVDFSQNAAAKTTAAPYTPRA
LPEPAVSTPVTWEEVEECQAPGALSFLIDDIPARLERHGDLLAPLLDPAQARPLPTGEGG
AGESDGEAGESDGEQDADDEGAVDR
NT seq 978 nt NT seq  +upstreamnt  +downstreamnt
atgtccccgatcgcggaggtggaggggcggcggatcgcgctcaggaacctcgacaaggtc
atccatccggccaccggcaccacaaagggcgagctgctgcactacctggcgtcgaccgcg
gacccgctcctcggtcatctgcgcgggcggccgctggcgttcctccgctacccggacggc
cccgacggccagaagttcttcaccaagaacccgcctcctggcacgccttcctgggtgacg
acggtcgaggtcacccgccataagggggagaccgcgcggcaggtgctgatcgaggacctg
ccctcgctgatgtgggcggccaacctcgtggtggagttccacgccccgatgtggcggatc
gaccagggcgtgggcatcgccgaccggctcgtcttcgacctcgaccccgggccgcccgcc
acgatcgtggactgccgcgtcgtggccgtatggctgcgcgagcggctggccgccgatggc
cttacggcgtatgcgaagaccagtggctccaaggggctgcatctgctggtgccggtggag
ccgacgccctcccaccaggtcaccgcctacgccagacggctggccctggaggccgcgaac
gccatgccggatctggtcatccgcaagatgacccgcgcgctgcgcccggggaaggtgtac
gtggacttcagccagaacgcggccgcgaagaccaccgccgccccctacaccccccgcgcc
ctccccgaaccggccgtctccacgcccgtcacctgggaggaagtcgaggagtgccaggcc
ccgggggcgctgtccttcctgatcgacgacatccccgcgcggctcgaacgccacggggat
ctgctcgccccgctgctggacccggcgcaggcgcgcccgctgccgacgggggagggcggt
gccggtgaaagcgacggagaagccggtgaaagcgacggcgaacaggacgccgacgacgaa
ggcgcggtcgaccgatga

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