Streptomyces violaceusniger: Strvi_5390
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Entry
Strvi_5390 CDS
T01602
Name
(GenBank) Beta-ketoacyl synthase
Organism
svl
Streptomyces violaceusniger
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
KR
Ketoacyl-synt_C
PKS_DH_N
ADH_zinc_N_2
PS-DH
ADH_zinc_N
adh_short
PP-binding
KAsynt_C_assoc
Thiolase_N
ADH_N
Epimerase
Docking
Polysacc_synt_2
GDP_Man_Dehyd
ACP_syn_III
Motif
Other DBs
NCBI-ProteinID:
AEM84917
UniProt:
G2NUV1
LinkDB
All DBs
Position
complement(6055145..6061768)
Genome browser
AA seq
2207 aa
AA seq
DB search
MSSSSQSEQIVEALRASLKDNARLKHEYDKAVAATSAPIAIVGMACRLPGGVSTPEELWE
LVSTGGDGISGFPVNRGWDLDNLFHPDPDHPGTSYATEGGFLHDAGEFDAGFFGISPREA
IAMDPQQRIMLELSWEVFERAGIDPTTKRGKDVGVYSGIAFHDYGAGLAEVPEGLEGFIL
TGGAGSVLSGRVSYALGLEGPAVTIDTACSSSLVALHLAAQALRAGECSMALAGGVTVMA
ASDAFVGFSRQRGLAPDGRCKAFAASADGTGFSEGAGVLLLERLSDAVSAGHPVLAVVRG
SAVNQDGASNGLTAPNGPSQRRVIRRALTSARLSACEVDVVEAHGTGTALGDPIEAQALL
ATYGRDRDRPLWLGSVKSNIGHTQAAAGAAGVIKMVMAMRHGLLPRTLHVDAPTPQVDWS
AGAVELLTSERPWPETERPRRAAVSGFGISGTNAHVILEEAPAAQPTEPGSAAENVTATA
ATDSVPSSPTPPVFDDGHDAPVPLLVSGRGESGLRAQAQRLLSFLDVRPAVALPDLGWSL
ASGRAALEQRGVVLAADRDGALRGLTALAQNTPASDVIRGTGPATGHIAFVFPGQGSQWQ
GMAAELLSSSPAFAARFAECDDALGRHLDWSVTDVIRGADGAPSLDRIEILQPALFAVHV
SLAATWAAAGAEPAAVVGHSQGEIAAAYVAGALSLEDAAGIVVLRSALFAEELVGKGAVA
SVALSADAVEKRLAAWGERLVISGRNGPSAVTVAGEVAALEEFVAGCKADGIRAQVVGST
VASHCAQVDPLRDRILAMFADITPRRGHIPFYSTVTGGVLDTGELDAEYWFRNARRPVNF
EGAVRELLADGFGFFVESSAHPVLVTALQQMFEDAGADAVAVGSLRRDEGGARRFLASLA
EGHVGGLPVDWSTVFAGSDPRRVDLPTYAFQHQHYWLESTETFGDAAGLGLEPAQHPLLG
AVTEFPESGGVLFTSRLSPRSHPWLADHAAAGTVLLPGAAFVELAVRAGDEVGCGVVEEL
VIEAPLTLGEGDGVRLQVFVGEAGDAGRRPLSVRSRPEGSGPGAAWTRHATGVLAPAAVT
TPPDTGLTQWPPAGAAPVDPERVSEAYEDMAAAGYGYGPAFRGLRAVWTRGEEVFAEVAL
AEDQGLSADGFGLHPVLLDSAMHAIAFRDLGAEQATLALPFAYRDVALHAAGASALRVRI
TPNGPEEVALQLADSGGAAVAAVGSVVSRPVATELLDTGASPTRERMFRVGWDELPAAVA
DTTADTPHPVPVATAEDIRELAETADLGVPEALLLDLTREALLLDMTPEALLPDLADDDQ
EPSASGVREATGRVLELLQTWLAAPELEDTRLLVLTHGAVAVHHDRELTDPTAAAVCGLL
RSAQAENPGRITLVDTDRAQASLALLSSVFTVEEPQLALRDGIRYARRLTRADTTGAPAV
PAGTAAWRLEPGTDGTLEGLALRPAPAALEPLAAGQVRIEVRAAGLNFLDVLVALDMSRV
DATIGNEGSGVVTEIGPGVDGLSVGDRVMGLFPDAVGPLAVADHRTVARIPHGWSFQQAA
TVPMAFLTAYYGLRDLAGLRSGESVLIHAAAGGVGMAAVQLARHWGAEVFATAAPAKWDA
VRATGIGEHRLGNSRTVDFAPRFLDATQGRGVDVVLDSLAGEFVDASLRLLPRGGRFLEM
GKADLRRPEEVAATHPGVSYQAFSLYEAGNDRIGEMLRELAELFDRGALRPLPLNTWDVR
NAPAAFRYMSQGRHIGKNVFTLPRALDTTGTVLVTGGTGSLGRLVARRMVAEHGMRNVVL
AGRRGRAAAGMPELEDELSALGATVHTVACDLADREAVAALLGSIPQDAPLTAVVHTAGL
LDDGVITTLTPERLDAVFRPKVDAVLNLHELTRDLDLATFLLFSSGAGTFDSPGQGNYSA
ANAFLDALARYRLARGLPATSLAWGLWGEVTDMSAHLDDSDQRRMAKGGMLGLSVPEGME
LFDTALRGPDTVLVPAHMDFAALRALAESGSLPALLRALVRAPRRAVDNAAADTDDLVSR
LARATAGQQEKILLDLVQQEAAAVLGHASADLIEPNQPFKEIGFDSLTAVELRNRLSHRA
GVRLPATLIFDHPAPAPLARYLLAELGQEVDTSEVLMAELDTVAATLAEVTPDATTHATV
LARLQLLVEQWETTEGATTADEDEEFDVDTATDEAMFELIDREFGTS
NT seq
6624 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagcagccagagtgaacagatcgtcgaagccctgcgcgcctcgctgaaggac
aacgcccggctgaagcacgagtacgacaaggcggtcgcggccacctccgctcccatcgcc
atcgtcgggatggcctgccggctgccgggcggggtgagcacaccggaggagctgtgggag
ctggtgtccaccggcggtgacggcatctccggctttccggtgaaccgcggctgggacctg
gacaacctcttccaccccgatccggaccaccccggcaccagctatgccacggaagggggt
ttcctgcacgacgccggtgagttcgacgcgggcttcttcggcatctcgccccgggaggcc
atcgcgatggacccccagcagcggatcatgctggagctgtcctgggaggtgttcgagcgc
gccgggatcgacccgaccaccaagcggggcaaggacgtcggtgtctactccggtatcgcg
ttccacgactacggcgccggtctcgccgaggtccccgaagggctggagggcttcatcctc
accggtggcgcgggaagcgtgctgtcgggacgggtctcctacgccctcggcctcgaaggc
cccgccgtgaccatcgacacggcgtgctcctcgtcgctggtggcgttgcatctcgcggcg
caggcgctgcgcgcgggggagtgctcgatggcgctggccggtggggtcaccgtgatggcc
gcctccgacgccttcgtgggcttctcccggcagcgcggactggcccccgacggccggtgc
aaggcattcgcggcctcggcggacggcaccgggttctccgagggcgccggtgtgcttctg
ctggagcgcctgtccgacgccgtcagcgcgggacacccggtgctggcggtggtgcgcggc
tcggcggtgaaccaggacggtgcgtccaacggtctcacggcaccgaacggcccctcacag
cggcgcgtcatccgccgggcgctgaccagcgcgcggttgtcggcctgcgaggtggacgtg
gtggaggcacacggcacgggtacggcgctgggcgaccccatcgaggcacaggccctgctc
gccacgtacggccgggaccgcgaccgcccgctgtggctgggatcggtgaagtcgaacatc
ggccacacccaggccgccgccggtgcggcgggtgtgatcaagatggtgatggcgatgcgg
cacggcctgcttccgcgcaccctgcatgtggacgcgcccacgccgcaggtggactggtcg
gccggcgccgtggagctcctgaccagcgaacggccatggccggagacggaacggccgcgc
cgggccgccgtatcgggcttcggcatcagcggcaccaacgcccatgtgatcctcgaagag
gccccggctgcccagcccaccgagcccggctcggctgccgaaaacgtcacggccaccgcc
gccaccgattcggtgccgtcctcgccgacaccgccggtgttcgacgatggccacgatgcc
ccggtcccgcttctggtgtccgggcggggcgagtcgggactgcgcgctcaggcccagcgc
ctgctgtcgttcctggacgtacgccccgcggtggccctgccggacctcggctggtcgctt
gcctccgggcgcgcggccctggagcagcgtggcgtggtgctggccgcggaccgggacggc
gcgctgcgcggcctgaccgcgctggcccagaacacccccgcatccgatgtgatccgcggt
accggaccggccaccggacacatcgccttcgtcttccccggccagggctcgcagtggcag
ggcatggcggccgaactgctctcctcctcaccggcgttcgccgcccggttcgccgaatgc
gacgacgcgttgggccgccacctggattggtccgtcaccgatgtgatccggggggccgac
ggagcgccctccctggaccggatcgagatcctgcaacccgcgctgttcgcggtgcatgtg
tccttggcggcgacgtgggcggcggccggggccgaacctgcggcggtggtcggccacagc
caaggcgagatcgcggcggcgtatgtggccggggcgctgtcgctggaggacgcggccggg
atcgtggtcctgcgcagcgccctgttcgccgaggaactggtgggcaagggcgcggtggcc
tccgtggcgctgtcggccgacgccgtggagaagcggctggcggcctggggcgagcggctg
gtgatatcgggacgcaacgggccctcggcggtgaccgtcgcgggcgaggtggccgcgctg
gaggaattcgtggccggctgcaaggccgacgggatccgggcgcaggtcgtgggctcgacg
gtggcctcgcactgcgcccaggtcgacccgttgcgggaccgcatcctcgccatgttcgcc
gacatcaccccgcgccgcggacacatcccgttctactcgacggtcaccggcggtgtgctc
gacaccggcgaactggatgccgagtactggttccgcaacgcacgccggccggtgaacttc
gagggcgccgtccgtgaactgctcgccgacggattcggcttcttcgtcgagtccagcgcc
catcccgtgctggtgacggcgctgcagcagatgttcgaggacgccggggccgacgcggtg
gccgtgggctccctgcggcgcgacgaaggcggtgcgcggcggttcctggcctccctcgcc
gagggccatgtgggtgggctgccggtggattggtcgacggtgttcgccggttcggacccg
cgccgggtcgatctgcccacgtacgccttccaacaccagcactactggctggagtcgacc
gagaccttcggcgacgcggccgggctcggcctcgaaccggcccagcaccccctgctgggc
gcggtcaccgaattccccgagtccggcggtgtgctgttcacctcccggctgtcgccgcgg
tcgcatccgtggctcgccgaccacgcggcggcgggcaccgtgctgctgcccggggcggcg
ttcgtggagctggcggtgcgcgccggtgacgaggtcggctgtggtgtggtggaagagctc
gtcatcgaggcaccgctcaccctgggcgagggcgacggcgtccgcctgcaggtgttcgtg
ggcgaggcgggcgacgccgggcggcgcccgctctccgtgcgctcccgcccggagggaagc
ggaccgggggcggcctggacgcgccacgccaccggtgtcctggccccggccgccgtcacc
accccgccggacaccggcctcacccagtggccaccggccggagcggccccggtggacccg
gagcgggtgtcggaggcgtacgaggacatggccgccgccgggtacggctacggaccggcc
ttccggggactgcgcgcggtgtggacccggggcgaggaggtgttcgccgaggtcgcactg
gccgaggaccaggggctctcggcggacggcttcggtctgcacccggtgctgctcgactcc
gccatgcacgccatcgccttccgcgacctcggcgccgagcaggccacgctggcgctgccc
ttcgcctaccgtgacgtcgccctgcacgccgccggagcgtcggccctgcgcgtccgcatc
acgccgaacggccccgaagaggtggcgcttcaactggcggactccggcggcgcggccgtc
gccgccgtgggatcggtggtgtcccggccggtggccaccgaactgctggacaccggcgcc
tcccccacccgggagcggatgttccgcgtcggctgggacgagcttccggcggccgtggcc
gacaccacagcggacacaccgcaccccgtaccggtggcgaccgccgaggacatccgggaa
ctggccgagaccgccgacctgggcgtgcccgaggcactgctcctggacctgacacgcgag
gcgctactcctggacatgacgcccgaggcgttgctcccggacctggccgacgacgaccag
gagccgagcgcgagcggcgtacgagaggccaccggccgggtgctggaactgctgcagacc
tggctggccgcacccgaactggaggacacccggctgctcgtgctcacccacggcgcggtg
gccgtgcaccacgaccgggagctgaccgaccccaccgccgccgccgtatgcggtctgctc
aggtccgcccaggccgagaaccccggacgcatcaccctggtcgacaccgaccgggcccag
gcgtccctggccctgctgtccagcgtgttcaccgtggaagagccgcaactggccctgcgc
gacggcatccgctacgcccgtcggctgacccgcgcggacaccaccggcgcgccggccgta
cccgccggcacggcggcctggcggctggagcccggcaccgacggcaccctcgaaggtctg
gccctgcgccccgcaccagccgcgctggagccgctggcagccggtcaggtccggatcgag
gtccgggcggcggggctgaacttcctggacgtgctggtcgccctcgacatgagcagggtc
gacgccaccatcggcaacgagggttccggagtggtcaccgaaatcggccccggggtggac
ggactcagcgtcggcgaccgggtgatggggctgttccccgacgccgtcggtccgctggcc
gtggccgaccaccgcaccgtggccaggatcccgcacggctggtccttccagcaggccgcc
accgtgccgatggcgttcctcaccgcctactacgggctccgggacctcgccggtctccga
tccggtgagtccgtactgatccacgccgccgccggcggggtcggcatggccgccgtacag
ctcgcccggcactggggcgccgaggtgttcgccaccgccgctcccgccaaatgggacgcc
gtacgcgccaccggaatcggcgaacaccggctcggcaactcgcgcacggtggacttcgca
ccgcgcttcctggacgccacccagggccggggcgtcgatgtggtgttggacagcctggcc
ggggagttcgtggacgcctcgctgcggctgctgccccgaggaggccggttcctggagatg
ggcaaagccgatctgcggcgccccgaggaggtggcagccacccatcccggcgtctcctac
caggcgttctccctctacgaggcgggtaacgaccgcatcggggagatgctccgcgaactg
gccgagctgttcgaccggggagcgctgcgcccactgccgctgaacacctgggacgtacga
aacgccccggccgccttccggtacatgagccagggacggcatatcggcaagaacgtgttc
accttgccccgcgctctcgacaccaccggcaccgtcctggtcaccggcggcaccggctcc
ctcggccgcctggtggcccggcgcatggtcgccgagcacgggatgcgcaacgtcgtcctg
gccggacggcgcggcagggccgccgcggggatgccggagctggaggacgagctcagcgcg
ctgggggccaccgtgcacacggtggcctgcgacctcgcagaccgggaagcggtggccgca
ctgctcggctcgatcccccaggacgccccgctgaccgccgtggtgcacaccgccgggctg
ctggacgacggcgtgatcaccaccttgaccccggaacggctggacgccgtgttccggccc
aaggtggacgcggtgctcaacctgcacgagctgacccgcgacctcgacctcgccacgttc
ctcctcttctcctccggcgcgggcaccttcgactctcccggccagggcaactactccgcc
gccaacgccttcctcgacgcactggcccgctaccgcctcgccagggggctgcccgccacc
tcgctcgcctggggcctgtggggggaggtcaccgacatgagcgcacacctggacgactcc
gaccagcggcgcatggccaagggcggcatgctcggcctctccgtacccgagggcatggag
ctgttcgacaccgcgctgcgcggccccgacaccgtgctggttcccgcccacatggacttc
gccgcactgcgcgccctggccgaatccggctcgctgcccgcactgctgcgcgccctcgtc
cgcgccccgcgccgggccgtcgacaacgcggcggcggacacggacgacctggtgagcagg
ctggcccgggcaaccgccggccagcaggagaagatcctgctcgacctggtccagcaggag
gccgccgccgtcctcggccacgcctcggccgacctcatcgaaccgaaccagcccttcaag
gagatcggcttcgactcgctcaccgccgtcgaactgcgcaaccggctctcccaccgcgcc
ggggtacgactgcccgccacgctcatcttcgaccaccccgcccccgcgccactcgcccgc
tatctgctggccgaactgggccaggaggtcgacacctccgaggtgctgatggccgagctc
gacaccgtggccgcgaccctggccgaggtgacccccgacgccacgacccacgccacggtg
ctggcccgcctccaactgctggtcgagcagtgggaaaccacggaaggcgccacaaccgcc
gatgaagacgaggagttcgacgtggacaccgcgaccgacgaagccatgttcgagctcatc
gaccgggaattcggcacatcgtga
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