Shewanella violacea: SVI_3999
Help
Entry
SVI_3999 CDS
T01206
Symbol
trpS
Name
(GenBank) tryptophanyl-tRNA synthetase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
svo
Shewanella violacea
Pathway
svo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SVI_3999 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svo01007
]
SVI_3999 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svo03016
]
SVI_3999 (trpS)
Enzymes [BR:
svo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
SVI_3999 (trpS)
Amino acid related enzymes [BR:
svo01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SVI_3999 (trpS)
Transfer RNA biogenesis [BR:
svo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SVI_3999 (trpS)
Prokaryotic type
SVI_3999 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
BAJ03970
UniProt:
D4ZDQ9
LinkDB
All DBs
Position
complement(4574580..4575587)
Genome browser
AA seq
335 aa
AA seq
DB search
MTNPTKPIVLSGAQPSGELTIGNYMGALKQWVALQDSHDCLYCVVDLHAITVRQDPKALR
EACLDTLALYLACGVDPKKSTVFIQSQVPQHTQLGWALNCYTQMGELNRMTQFKDKSQKH
ASNINVGLFAYPVLMAADILLYQANEIPVGQDQKQHLELTRDIATRFNNAYGETFAIPEP
FIPELGAKVMSLQDPLKKMSKSDDNRNNVIGLLEDPKKIMKKIKKAMTDSDEPPVVRFDT
ENKPGVSNLLSLMSGVTGKSIAGLEAEFEGKMYGHLKVATGEAVVEMLEPLQARYREFRK
DTTFLHQVMRDGAEKAQARAEVTVKKVYEKIGLIV
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgactaaccccacaaaacccatagtactcagcggtgcacaaccgtctggagagctaacc
ataggcaactacatgggcgcattgaaacagtgggtagctctgcaagatagtcatgactgc
ctctactgcgttgtcgatctgcatgccattacggtgagacaagatcccaaagctctaaga
gaagcttgtctagatactttggccttataccttgcttgtggggtcgaccctaagaagagt
acggtatttattcagtctcaggttcctcagcacactcaactaggttgggcactgaattgc
tatacccagatgggcgagcttaaccgtatgactcagtttaaagataagtcacagaagcat
gccagcaacatcaatgtgggtctatttgcctacccggtattgatggcagccgatattctt
ctgtatcaagccaatgagatccctgttggtcaagatcagaagcaacacttagaactgaca
cgtgatattgccactcgtttcaataatgcttatggtgagaccttcgccattcccgagcct
tttattcccgagcttggtgctaaggtgatgtcgctgcaagatccgcttaagaagatgtcc
aagtctgacgataaccgtaataacgttattggcttactggaagatcctaagaagatcatg
aagaagatcaagaaggcaatgacagatagcgatgagccacctgtggtacgtttcgataca
gagaacaagcctggggtgtctaacctacttagtttgatgtcaggtgtcacgggtaagagt
attgccggtctagaagccgaatttgaaggcaagatgtacggccatttaaaagttgccacc
ggtgaagccgtagttgagatgttagagccgcttcaggcgcgttatcgcgaattcaggaaa
gacactacattcttgcatcaagtgatgcgtgacggagcagagaaggcacaggctcgcgcc
gaagttaccgtgaagaaggtctacgagaaaataggccttattgtttag
DBGET
integrated database retrieval system
