Shewanella woodyi: Swoo_2007
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Entry
Swoo_2007 CDS
T00676
Name
(GenBank) Pyridoxal-dependent decarboxylase
Organism
swd
Shewanella woodyi
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
Phe_hydrox_dim
Torsin
Phage_sheath_1N
PMT_C3
Motif
Other DBs
NCBI-ProteinID:
ACA86291
UniProt:
B1KQQ2
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Position
complement(2465602..2466813)
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AA seq
403 aa
AA seq
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MRKHGLSKSEVYSNIQKLRQTDVPWDRVLNSICTQPHEVAVKAFTDAIDTNLGDVRIFQG
THQIEQQVIQSISTFLHAKEPAGSLVSGGTEANLLALYVAKKQARSKAKNRHVSEVICAE
TVHYSMKKIFDLLDLTAVILPVDEKFRMDISQINKHISENTVAIVATAGSSEFGSIDPIE
ELSDIAVAHQIYLHVDAATGGFIIPFAKALGYQLPNFDFSLPGVSSITMDPHKYGLANIP
AGGIFFRDQSLIELISLDSFFINTPSHKTFLGTRPGGAAVATFAVLEHLGWDGYKEITRK
NYATMEYLVEQLKWRNYQLASPPELNIVIVDLPNAEEVMTLLEEWDWIISVSKRFRHCLR
LVITAHVNIEMIDNFLTVLDGAVNCLSDTASLENTQASHGAKG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaacacggcctctctaaatcagaagtatattccaatatacagaagctacgtcaa
accgatgtaccttgggatcgagtactgaactctatctgtactcagcctcatgaggtcgca
gttaaggcatttactgatgcaatagataccaacctcggtgatgttcgtatttttcagggt
acacatcaaattgagcaacaggttattcagtccatatctacctttttacatgcaaaagaa
cctgcaggtagcctagtttccggaggaacagaagcaaacctattagccctatacgttgcc
aaaaagcaggcaagaagcaaggcaaagaacagacatgtcagtgaagttatttgtgctgaa
actgtgcattactctatgaaaaagatctttgacttgttggatttaacagcggtgatctta
cctgtagatgaaaaattccgtatggatatttctcaaatcaacaaacatatttcagaaaat
actgtagcaatagtcgcaacagcgggtagcagtgaattcggttcaatcgatccaattgaa
gagttaagtgatattgcagtggcgcatcaaatctacctacatgtcgatgccgcaacaggg
ggctttatcattccatttgccaaagcactgggataccaattacccaatttcgactttagt
ttaccaggcgtatcctcaataacgatggaccctcataaatatggtttagccaatattcct
gcggggggcatattctttcgtgatcagagtttaattgaactgatatctcttgactcattt
tttattaacacacctagccataagacatttttaggcacaagacctggcggtgctgcagtt
gcaacctttgcggttttagagcacttaggctgggatggttataaagagatcacacgtaag
aattacgccactatggagtacttggtagagcaactaaagtggcgaaactatcaactcgcc
tcaccacctgagttaaatattgtgatagttgacctaccaaatgccgaagaggtcatgaca
ttactggaggagtgggattggataatttcagtatcaaagcgattcagacactgtctacgg
cttgtcattactgcccatgtaaacattgagatgattgacaactttctaactgtgttagat
ggggcagtaaactgcctgagcgatacagcctccttagaaaatacacaagcaagtcatggg
gctaaaggatga
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