Shewanella woodyi: Swoo_4069
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Entry
Swoo_4069 CDS
T00676
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
Organism
swd
Shewanella woodyi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
HTH_50
HTH_30
FleQ
AAA_5
AAA_29
P22_Cro
nSTAND3
AAA
HTH_7
Motif
Other DBs
NCBI-ProteinID:
ACA88325
UniProt:
B1KH13
LinkDB
All DBs
Position
complement(4939849..4941306)
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AA seq
485 aa
AA seq
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MDTILIVDDNQAVCNALSLMLELNGFNTLTCLSPEVALELIRLHDIALVVQDMNFTQDTT
SGEEGKALFYALRELQPELPIVLLTAWTQLEIAVELVKEGAADYMGKPWDDTKLVTSINN
LISLHALSKANTQLTRVENDRMSAIKGADLCGIVFGSGAMQRSVDLALQIARSDVSVLIT
GPNGAGKDKLADIIHANSSLKTKPFIKVNVGALPIDLLEAELFGAEAGAFTGANKTRIGR
FEAADGGTLFLDEIGNLPLSGQIKLLRVLQTGEFERLGSHQTKKVNVRVLSATNADLAED
IKQGCFREDLFYRLNVIELALAPLNQRQDDILPLVEHFIGREFSLNKQAQESLVAHPWPG
NVRELENACKRAVILASSPKLTPSDFGLGSISHLSEDDSSVRSAQVQALVQSQVQAQSDT
ASSISPESTEQLDSRGAETDKTQLEKSEIEAALIQHGGVIARVAKSLGLSRQALYRRMEK
FGIDK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggatacgattctcatcgtcgatgacaaccaagcagtgtgtaacgcattgtcgcttatg
ttagagctgaacggctttaatacccttacttgtctctctccagaggttgccctcgaactc
attcgattacatgatatcgccttagtggttcaggatatgaacttcacccaagacaccacc
tctggtgaagagggaaaggccttgttttatgcgctgagagagctgcagcccgagctacct
atcgtattgctaacggcatggactcaacttgagatagctgttgagttagtaaaagaggga
gcagcagattatatgggcaaaccttgggatgacaccaagttagtcactagtatcaataat
ctgatctcattacatgcgttatctaaagccaatactcaactgactcgagttgaaaacgat
cgtatgtcagcaattaaaggcgcagatctgtgtggcattgtctttggcagtggcgccatg
caacgtagcgtggatttggcactacagatcgctcgctccgatgtctctgtgctgatcact
ggccccaatggtgcgggtaaagataagcttgccgatatcatacacgcgaactcatcgctc
aaaaccaagccttttatcaaggttaacgttggcgctttgccgattgatctattagaggct
gagctgtttggtgcagaggctggagcatttacaggtgctaacaagacacgtattggtcgt
ttcgaggcagccgatggtgggactttatttctggatgagataggtaatttgcccttgtcg
ggtcagatcaaactattgcgggtgttgcaaactggcgagtttgagcgtcttgggagtcac
cagactaagaaagtgaatgtcagggtactcagtgcaaccaatgctgaccttgctgaagat
attaaacaggggtgttttcgtgaagacctcttctatcgacttaacgtgattgagcttgcc
ttagcaccgctcaatcaacgtcaagatgatatattgcctctggtcgaacactttattggc
agagagttttcactgaataaacaagcgcaagaatcattagttgcacacccttggcctggc
aatgtacgtgagctggaaaatgcctgtaagcgagctgtgatcttagcaagtagccctaaa
ttaacgccatcggattttggccttggtagcattagccacctgtctgaagatgattccagt
gttcgctctgctcaagtacaagcccttgtacagagtcaagtacaagctcagtctgatact
gctagctcaataagtcctgagtctacagagcagcttgattcaagaggggcagagaccgat
aaaactcagcttgagaaaagtgagatagaagctgcgcttatccaacatggtggggttatc
gccagagtggccaaatcattaggtttgagtcgccaagcgctttatcgcagaatggaaaaa
ttcggcatagataaataa
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