Shewanella woodyi: Swoo_4203
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Entry
Swoo_4203 CDS
T00676
Name
(GenBank) TIM-barrel protein, yjbN family
KO
K05539
tRNA-dihydrouridine synthase A [EC:1.-.-.-]
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swd03016
]
Swoo_4203
Transfer RNA biogenesis [BR:
swd03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
Swoo_4203
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dus
Motif
Other DBs
NCBI-ProteinID:
ACA88459
UniProt:
B1KHY1
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Position
complement(5106818..5107813)
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AA seq
331 aa
AA seq
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MSSQNTKSSVKPLNRTFSIAPMLDWTDRHYRYLARLMSAELLLYTEMVTTGAIIHGKGDY
LAYNEEEHPLALQLGGSNPHDLAICAKQAVERGYDEINLNVGCPSDRVQSGRFGACLMAE
PSLVAECVTAMRAVADIPVTVKTRIGIDEQDSYEFLTEFVETVRDAGCDTFIVHARKAWL
QGLSPKENREIPPLDYDRVYQLKRDYPDLSISINGGVKSLEECKVHLVKLDGVMVGREAY
QNPYILAKVDQQLCGLDKPVLSRDAVLEKFIPYIEKHLQAGGRLNHITRHMTGLFQGEVG
SRIWRRYISENAHKPGSGIEVIEQARKNMTS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcaaaacacaaaatcatcagtaaaacctctcaatcgcaccttctcaatcgcg
cccatgctggattggaccgatcgtcactatcgttatctagctcgtttgatgtcagcagaa
ctgcttctttacactgagatggtcaccacaggggcaattattcatggtaagggagattac
ctcgcgtataacgaggaggaacaccctttagccttgcaactcggcggttctaatccacat
gatttggcgatttgtgccaaacaggcagttgagcgaggctatgatgagatcaacttaaat
gttggttgtccttcagatcgtgtacagagtgggcgttttggtgcttgcctgatggcagag
ccttcattagttgctgaatgtgtgacggctatgcgggcagtggctgatattccggtgacc
gtaaagacgcgtattggtatcgatgaacaagatagttatgagtttttaactgagtttgta
gaaacagttagagatgcaggttgcgacacctttattgttcatgccagaaaagcttggttg
cagggcttaagtccaaaagagaaccgtgagatcccaccactggactacgatagagtatat
caacttaagcgtgattaccccgatttaagcatctctattaatggcggtgtgaagtcatta
gaggagtgcaaggttcatttggtgaaattagatggtgtgatggttgggcgtgaagcgtat
caaaacccctatattttggctaaggtcgatcagcagctttgtggattagataaacctgta
ttaagccgagatgctgttttagagaaatttattccctatatagagaaacacctgcaagcc
ggtggtcgtttgaatcatattactcgccatatgactggattgtttcaaggggaagtgggt
tctaggatctggaggcgctatataagtgaaaatgcgcataagccaggttccggtatagaa
gtcattgaacaagcaagaaaaaatatgacttcttaa
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