Rhizorhabdus wittichii RW1: Swit_3688
Help
Entry
Swit_3688 CDS
T00538
Name
(GenBank) Type IV secretory pathway VirD2 components (relaxase)-like protein
Organism
swi
Rhizorhabdus wittichii RW1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3363
MobL
Relaxase
Polyoma_coat2
Motif
Other DBs
NCBI-ProteinID:
ABQ70034
UniProt:
A0A9J9HE93
LinkDB
All DBs
Position
4050401..4052212
Genome browser
AA seq
603 aa
AA seq
DB search
MRKSRTVRRWLETSSAQGLPHIAACPGMSRDDDFRLRPGRIRSRGSQRALPIIVQALAAA
QRAGGHVSRRGRIVAPGRSTFGRGRVASVRATHRLGHRSRQVIVKARVVRHGGRASLAAH
LNYLQRDGVTRDGERGVLFGAEAEGLDRNEFATVCENDRHHFRFIVSPEDAPQMGDLKGF
TRELMTRMEKDLGTRLDWRAVEHWNTDNPHVHIIVRGVGEDGQNLVISRDYIREGMRAQA
REIVTQELGPRTDLEIRQSLERQVEAERWTEIDRDLSRTMQRNGLIDMAPEPGVRPDGDH
VLRMGRLRKLERLGLASEIAPGQWTLAGDAQAALRELGERDDIIKRMHKAMSDRGIDRGA
GSYVLDTDPAQPVVGRLVDRGLHDELTGKAYAIVDGIDGRTHHVQLPDIEATGDCRPGAI
VELRRFEDRKGRQRVALAVRSDMDLEAQVRAPGATWLDRRNLASDGHDLGGGFGTEVRAA
MEARAEHLADEGLARRQGQRIIFARNLLDTLRRRELDAAAKDLSAEIGLPHAPSKAGEYV
AGTVRQRITLASGRFAMIDNGLSFQLVPWSPSLDRQIGKHISGVMRAGGGVDWSFGRGRG
LGL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgcggaaatcccgcactgtgcggcgctggctggaaaccagcagcgcgcagggtttgccg
cacattgcggcctgtcccggcatgagccgcgacgacgatttccgcctccggccaggccgt
atccgctcgcgcggtagccagcgggcgctgccgatcatcgtccaggcactcgccgccgcg
cagcgggccggcggccatgtctcgcgccgcggccggatcgtcgcgccgggccgctcgacc
ttcggccggggccgcgtggcgagcgtccgcgcaacccaccggctcggccaccgatcgcgc
caggtcatcgtcaaggcgcgcgtggtccggcatggcggccgcgcctcgctcgcggctcat
ctcaactatctgcaacgcgatggcgtcacccgcgacggcgagcggggcgtgctgttcggc
gccgaggccgagggtctcgaccgcaacgagttcgcaacggtgtgcgagaacgaccgccac
cacttccgcttcatcgtctcgcccgaggatgcgccccagatgggcgacctcaagggcttc
acccgcgagctgatgacgcgcatggaaaaggatctcggcacccgcctggactggcgggcc
gtcgagcattggaacaccgacaatccccacgtccacatcatagtgcgcggcgtcggcgag
gacgggcagaacctcgtcatctcgcgcgactatatccgcgaggggatgcgggcgcaggcg
cgcgagatcgtcacccaggaactcggcccgcgcaccgaccttgaaatccggcaatcgctg
gagcggcaggtcgaagccgagcgctggaccgagatcgaccgcgacctttcgcggaccatg
cagcgcaacggcctgatcgacatggcgcccgagcccggcgtccggccggacggcgaccat
gtgctgaggatgggacggctgcgcaagctggagcggctcggcctcgccagcgagatcgcg
cccggccagtggacgctggccggcgatgcccaggcggcgctgcgcgaactcggcgagcgc
gacgacatcatcaaacggatgcacaaggcgatgagcgaccgcggcatcgaccggggcgcc
ggcagctatgtcctcgacaccgatcccgctcagcccgttgtcggccggctggtcgatcgc
ggcctgcatgacgagctgaccggcaaagcctatgcgatcgtggacgggatcgacgggcgc
acccaccatgtccagcttcccgacatcgaggcgaccggcgattgccggccgggcgcgatc
gtcgagctgcgccgcttcgaggaccggaaaggccggcagcgggtggcgctcgccgtgcgc
tccgacatggaccttgaggcgcaggtccgcgcgccgggggcgacctggctcgaccggcgc
aacctcgcgagcgacggccatgatctcggcggcggcttcgggaccgaggtgcgcgccgcg
atggaggcccgcgccgagcatctcgccgacgaggggctcgcgcggcggcagggacagcgg
atcatcttcgcgcgcaatctgctcgacacgctccgccgccgcgagctggacgcggccgcc
aaggatttgtcggccgagatcggcctgccgcacgcgccgtccaaggccggggagtatgtc
gcgggcacggtgcgccagcggatcacgctcgcctcggggcgcttcgcgatgatcgacaac
ggcctgagcttccagctcgtgccctggtcgccctcgctcgatcggcagatcggcaagcac
atctccggcgtcatgcgcgcgggcgggggcgtcgattggtcgttcggacgcggccggggg
ctgggcctgtag
DBGET
integrated database retrieval system
